Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2016 ATGGGTCGCCATTCCTGTTGTGCGAAGCAAAAACTCAGGAAAGGCCTATGGTCCCCTGAAGAAGACGAGAAGCTCTTCAATTACATTACCACATATGGAGTTGGCTGCTGGAGTTCTGTCCCCAAACTTTCTGGATTGCAAAGATGTGGAAAGAGTTGCAGATTGAGATGGATCAACTATCTGAGGCCTGATTTGAAGAGAGGCATGTTCTCGCAACAAGAAGAAGATCTCATAATCAGTCTTCATGAAGTTCTTGGCAATAGGTGGGCTCAAATTGCAACACAATTACCGGGACGAACAGACAATGAGATTAAGAATTTCTGGAACTCATGTCTGAAGAAGAAGCTATTGAAGCAAGGGATTGACCCAACCACTCACAAGCCCTTAGTAGTTACTAAACCTGAAATAAAGGAAGAGAAGAAGATTCTTACAGATTCAGAGACACCACCATTACCGTTACCTTCTTCTATTCAAACACCATTTTCAGTTTCAGGTTCAAGTTCAGCCACAACAACAACAATAAGCAGCTTATTAGGCTTCTCTCCACAAGGCTCAGCTTTTCTAGCAAGCGATTCGAACCACTTCGATAGTGGCTTGGACCCACTGATGTCCTACCTCGAGTCCCAAATAAATCAGCGTCGCATTTTCGGGTGTGACAATGAAAGTGAACATTATAGACCATATGATCAGAACAATTCAGGGTATGGGTTAGTCAATATGGCTTCGATGCCGAATTTAACCAATTTGGTGACAGAGTTTTCGTCTGGTTCGAGAGTCAGCACGAGCAATGCCTCCAACATGAGCAATTACAATGTGGCAAAAGGAGGCATGTTTCAAGTGAATGGGATTAAGAACGAACAAGAATTGACGAAGACGGGGTCGTGGGAAGAAGATGAAGGGCAGCTTCTGAATCAAAGTTCTTTAGATTTCACCTGCACCTATCCGTTAACGTCACTGTCAGAAGATCTAATAACAGCCCCGAATTTTGACGTCTTCCACCATATATGA 1008 0.4315 MGRHSCCAKQKLRKGLWSPEEDEKLFNYITTYGVGCWSSVPKLSGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIATQLPGRTDNEIKNFWNSCLKKKLLKQGIDPTTHKPLVVTKPEIKEEKKILTDSETPPLPLPSSIQTPFSVSGSSSATTTTISSLLGFSPQGSAFLASDSNHFDSGLDPLMSYLESQINQRRIFGCDNESEHYRPYDQNNSGYGLVNMASMPNLTNLVTEFSSGSRVSTSNASNMSNYNVAKGGMFQVNGIKNEQELTKTGSWEEDEGQLLNQSSLDFTCTYPLTSLSEDLITAPNFDVFHHI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2016 335 CDD SANT 70 109 IPR001005 -
Bisa08g2016 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa08g2016 335 PANTHER MYB DOMAIN PROTEIN 55 1 269 - -
Bisa08g2016 335 Gene3D - 69 144 - -
Bisa08g2016 335 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa08g2016 335 CDD SANT 17 61 IPR001005 -
Bisa08g2016 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa08g2016 335 FunFam Myb transcription factor 11 67 - -
Bisa08g2016 335 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bisa08g2016 335 Gene3D - 11 67 - -
Bisa08g2016 335 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa08g2016 335 FunFam Transcription factor MYB86 69 139 - -
Bisa08g2016 335 SMART sant 13 63 IPR001005 -
Bisa08g2016 335 SMART sant 66 114 IPR001005 -
Bisa08g2016 335 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa08g2016 335 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2016 Bisa-ChrBisa08 48530890 48532185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2016 1 151 MYB Transcription Factor Family AT4G01680 75.497 3.13e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g2016 Myb_DNA-binding 2.1e-13 CL0123