Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2014 ATGGCATCATCATCATCATCATCATCAAGCTCTTACAATTCACCCTGTGCTGCCTGCAAATTCTTGAGAAGAAAATGCATGCCAGGCTGCATCTTCGCGCCATACTTCCCGCCGGAGGAGCCCCAGAAATTCGCCAATGTCCACAAAATCTTCGGTGCCAGCAACGTCACCAAGCTCCTCAACGAGCTCCCTCCCCAGCAGAGGGAAGACGCCGTCAACTCCCTCGCCTACGAGGCGGAGGCCCGAGTCCGGGACCCAGTCTACGGCTGCGTCGGCGCCATCTCCTTCCTCCAGCGGCAGGTCCAGAGGCTCCAGAAGGAGCTCGACGCCGCCACCGCGGATCTCCTCCGCTACGCCTGCCCCGACATGGCGTCACCACATGGATTGACGACTTCAGCTCAACCTAATATTCCTCAGAGACAACAAAGACCTATGGAGTTTGGTAGCGGTGGGTATTATAATAGTCAATCGTCTGCAAGTTTCTCTCATCCTTATTCTCTACCTTGGACCGATTCTTCTGATGACATCAATGAGGGTGGAGGAGGTAATTTGTGA 555 0.5459 MASSSSSSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPPQQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAATADLLRYACPDMASPHGLTTSAQPNIPQRQQRPMEFGSGGYYNSQSSASFSHPYSLPWTDSSDDINEGGGGNL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2014 184 Coils Coil 94 114 - -
Bisa08g2014 184 Pfam Lateral organ boundaries (LOB) domain 15 111 IPR004883 -
Bisa08g2014 184 MobiDBLite consensus disorder prediction 127 184 - -
Bisa08g2014 184 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Bisa08g2014 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2014 Bisa-ChrBisa08 48460314 48460868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2014 6 133 AS2 family AT5G63090 84.375 1.15e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa08g2014 LOB 4.5e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2014 08 48460314 48460868 Bisa02g1259 02 21059866 21060483 CCT
Bisa08g2014 08 48460314 48460868 Bisa02g1259 02 21059866 21060483 ECH
Bisa08g2014 08 48460314 48460868 Bisa08g2014 08 48460314 48460868 ECH