Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2005 ATGCTTAGAGCTCCCACAAGACATGATTTGGTTCCTTCCCGTTGTTCCTCCCTAGGTTCAAACCTTTCTCTCTGTTCTCTCATTGGAGTTCGTAGCATAGTTGTAATGCCTGAAAACCCATGGACCCTCTTCTTTCTATTATCTGCTCTTTTATGTCCATACCTTTCTTTTATAGCTTCTGCAGTTAACCCACAAGGCCAAGCTCTTCTTTCATGGAGGGCAACCCTGAACGGGTCCTTGGAGGTGCTGAGTAATTGGGACCCAATTGACGAAAGACCATGTGGGTGGTTTGGAGTTAGCTGCAACTTCAAGAACGAGGTTGTACAATTAGATCTGAGGTATGTTCATTTGCTTGGAAAGCTTCCTTCTAATTTCACCTCATTGGTCTCCTTGACCAAGCTTATCCTCACGGGAACGAACATCACTGGTTCAATCCCAAAAGAGATAGGCACTCTTGGCAATCTCACCCACTTGGACTTGAGTGACAATGCCTTGACTGGTGAAATCCCGAGCGAGCTTTGCTTTCTGCCAAAGCTTGAGCAACTATACCTGAATTCAAACCAGCTTGTGGGGTCGATTCCTATTGCAGTTGGAAATCTCACAAAGTTGGAGTGGCTGATCTTATATGATAACCAGCTAAGTGGTGAAATCCCCAAAACTATTGGTAATATGAAGAACCTGCAAGTGATTAGAGCTGGTGGTAACAAGAACCTTGGAGGTACTTTACCTCAAGAAATTGGAAATTGTACCAGATTGGTCATGTTGGGTCTAGCTGAAACTAGTATCTCAGGATTCCTTCCACCAACTGTTGGCCTCCTCAAGAAGCTGAACACCATAGCAATTTACACTTCCCTCCTATCAGGCCAGATTCCTCCTGAACTTGGCGACTGCACTGAACTTCAGAACATTTATCTGTACGAGAACTCCCTCACTGGCTCATTACCGAGCACACTGGGAAATCTTAAGAATCTCGAGAATCTTCTATTGTGGCAGAACGATTTAGTTGGTACCATCCCGCCACAAATTGGAAATTGCTACCAGTTAGCCGTTATTGATATTTCAATGAACTCACTAACAGGAAGCATCCCCAAAAGTTTCGGAAATCTGACGGCGCTGGAAGAACTTCAGCTTAGCGAAAATCAGATTTCAGGCGAGATTCCAACAGTACTGGGGAACTGCCAGCAACTCACTCACGTCGAACTGGACAACAATCAAATCACGGGTACGATTCCTTCTGAATTTGGAAACCTTAGTAACCTGACGTTGTTGTTTCTATGGCATAACAAGCTCGAAGGAAGTATTCCATCTTCCCTTTCAAATTGCCAAAACCTCGAGGCTGTGGATCTTTCACAGAATGCACTGACCGGTCCCATATCAATGGGGATATTCGAGCTCAAGAATCTGAACAAGCTTTTGCTACTTGCTAATAATCTCTCCGGGAAGATACCATCTGAGATTGGGAATTGTTCGTCTTTGATTCGGTTCCGAGCGAGCGACAATGAGATCACAGGTAGCATACCTCCAGAGATTGGGAATCTGATAAACTTGAACTTTTTGGATCTTGGAAGCAACCGGATATCCGGATTTATTCCGGAAGAGATCTCAGGCAGCAAGAACCTTACGTTTTTGGACCTACATTCCAACTTGATTGCCGGGAACTTGCCGGAGAGTCTGAGTCAGCTTGTCTCTCTTCAATTTATTGACGTCTCCGATAACATGATCGAAGGCACACTAAGCCCGAGACTAGGATCGCTTGGTTCACTCACAAAACTCATTCTCGGAAAGAATCATCTCTCCGGCTCAATTCCGAGTCAACTTGGTTCTTGTGCAAAGCTTCAGTTGCTGGACCTCAGCTGCAATAATCTCTCAAGAGACATCCCCGGTAGTCTGGGCAATATTCCGGCGCTGGAAATCGCACTGAATCTGAGCTGGAATCACCTCTCTGGTGAGATTCCTCAGGAGTTTTCAGGCCTGGTTAAGCTCGGAATCTTAGACATTTCCCACAACCAGCTCACCGGAAACCTTCAGTATCTCGCCGACCTCCAAAATCTCGTTGTCCTCAACATTTCCTACAACAAATTCTCCGGCCGCGTTCCGAACACGCCTTTCTTCGCAAGGCTTCCTCTCAGTATGCTGGCCGGGAACCCGTCGCTGTGCTTCTCCGGTAACCAATGCGCAGGGGAAGATTCTGGAAGTCGTTCAAGTAAGCGCGCAAAGACGGCCCGTGCAGCTATGGTGGTCCTACTCTGCATCGCTTGTGTTCTCCTGTTGGCGGCGCTATATGTCGTCGTCGCCGCAAAACGACGACGCAGGGACCCCGGGAGTGATCTCGACCTCGATGGAAAGGAAAGCGACGTGGAGATGGGCCCACCGTGGGAAGTAACACTCTACCAGAAGCTCGACCTGTCAATCTCCGACGTGGCAAGGTGCCTCACAGCTGGCAACGTCATCGGGCGTGGGCGGTCCGGCGTCGTTTACAGGGTGAACATCCCGGCGGGACTAGACATCGCCGTGAAGAGGTTCAGTTCGTCGGAGAAATTCTCGGCGGCGGCATTCTCGTCGGAGATAGCGACGCTGGCGAGAATCCGGCACCGGAACATAGTGAGGCTATTGGGTTGGGGGGCGAACCGGAGGACGAAGTTACTGTTTTATGACTATTTACCGAACGGTAATTTGGACACGCTGTTACATGAGGGGTGCACAGGATTAATCGAGTGGGAGACAAGGTTCAGGATAGCATTGGGCGTAGCTGAAGGTTTAGCTTATTTGCATCATGACTGTGTGCCTGCTATCTTGCACCGGGACGTAAAAGCGCAGAACATATTGCTGGGAGACAGATACGAACCGTGTTTGGCAGATTTTGGGTTTGCGAGACTGGTTGAAGATCATCACAATTCCTATTCCCTGAACCCACAGTTCGCGGGTTCCTACGGCTACATTGCGCCAGAGTACGGTTGCATGCTGAAAATAACAGAGAAGAGCGACGTGTACAGTTACGGCGTGGTGCTCCTAGAGATCATTACTGGAAAAAGACCCGTCGACGCGTCGCTCGGCGACGACGGACAACACGTAATCGAATGGGTGAAAGATCACTTGAAGAAGAAGAAGGACCCTGTGGAGATCGTGGATCCGAAGCTTCAAGGCCTTCCAGACACTCACATTCAAGAGATGCTTCAAGCGCTTGGCATCTCTCTCCTCTGCACCAGCACGCGCGCAGAGGATCGCCCCTCCATGAAAGACGTCGCAGCTTTATTGCGGGAAATCCGTCACGATCCTCCCGCGGGCCCAGAGGCCCAGAAGCCCAAGCCCAACACCAACACATCCTCCTCCTCTGTCACTCCAGCTCAGTTGTTGCTCCTTCATCCATCTTCTCACTCTTCGTCGCTTGCTTATTCGTCTTCCTCCATTCCTGGTTATCACAAATCGGAAGGACGACGATGA 3441 0.4906 MLRAPTRHDLVPSRCSSLGSNLSLCSLIGVRSIVVMPENPWTLFFLLSALLCPYLSFIASAVNPQGQALLSWRATLNGSLEVLSNWDPIDERPCGWFGVSCNFKNEVVQLDLRYVHLLGKLPSNFTSLVSLTKLILTGTNITGSIPKEIGTLGNLTHLDLSDNALTGEIPSELCFLPKLEQLYLNSNQLVGSIPIAVGNLTKLEWLILYDNQLSGEIPKTIGNMKNLQVIRAGGNKNLGGTLPQEIGNCTRLVMLGLAETSISGFLPPTVGLLKKLNTIAIYTSLLSGQIPPELGDCTELQNIYLYENSLTGSLPSTLGNLKNLENLLLWQNDLVGTIPPQIGNCYQLAVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGEIPTVLGNCQQLTHVELDNNQITGTIPSEFGNLSNLTLLFLWHNKLEGSIPSSLSNCQNLEAVDLSQNALTGPISMGIFELKNLNKLLLLANNLSGKIPSEIGNCSSLIRFRASDNEITGSIPPEIGNLINLNFLDLGSNRISGFIPEEISGSKNLTFLDLHSNLIAGNLPESLSQLVSLQFIDVSDNMIEGTLSPRLGSLGSLTKLILGKNHLSGSIPSQLGSCAKLQLLDLSCNNLSRDIPGSLGNIPALEIALNLSWNHLSGEIPQEFSGLVKLGILDISHNQLTGNLQYLADLQNLVVLNISYNKFSGRVPNTPFFARLPLSMLAGNPSLCFSGNQCAGEDSGSRSSKRAKTARAAMVVLLCIACVLLLAALYVVVAAKRRRRDPGSDLDLDGKESDVEMGPPWEVTLYQKLDLSISDVARCLTAGNVIGRGRSGVVYRVNIPAGLDIAVKRFSSSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRFRIALGVAEGLAYLHHDCVPAILHRDVKAQNILLGDRYEPCLADFGFARLVEDHHNSYSLNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASLGDDGQHVIEWVKDHLKKKKDPVEIVDPKLQGLPDTHIQEMLQALGISLLCTSTRAEDRPSMKDVAALLREIRHDPPAGPEAQKPKPNTNTSSSSVTPAQLLLLHPSSHSSSLAYSSSSIPGYHKSEGRR 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2005 1146 Gene3D Transferase(Phosphotransferase) domain 1 887 1104 - -
Bisa08g2005 1146 Pfam Leucine rich repeat N-terminal domain 63 102 IPR013210 -
Bisa08g2005 1146 ProSitePatterns Protein kinases ATP-binding region signature. 817 839 IPR017441 GO:0005524
Bisa08g2005 1146 MobiDBLite consensus disorder prediction 1100 1139 - -
Bisa08g2005 1146 SUPERFAMILY RNI-like 333 688 - -
Bisa08g2005 1146 ProSiteProfiles Protein kinase domain profile. 811 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2005 1146 Gene3D Phosphorylase Kinase; domain 1 796 886 - -
Bisa08g2005 1146 Pfam Protein kinase domain 814 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2005 1146 ProSiteProfiles Leucine-rich repeat profile. 154 177 IPR001611 GO:0005515
Bisa08g2005 1146 SUPERFAMILY RNI-like 110 431 - -
Bisa08g2005 1146 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 460 554 - -
Bisa08g2005 1146 SMART LRR_typ_2 681 714 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 369 393 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 152 176 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 200 224 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 321 345 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 585 609 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 513 537 IPR003591 -
Bisa08g2005 1146 SMART LRR_typ_2 417 441 IPR003591 -
Bisa08g2005 1146 PANTHER UNNAMED PRODUCT 329 1016 - -
Bisa08g2005 1146 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 236 459 - -
Bisa08g2005 1146 Gene3D Ribonuclease Inhibitor 639 726 IPR032675 -
Bisa08g2005 1146 Gene3D Ribonuclease Inhibitor 397 638 IPR032675 -
Bisa08g2005 1146 SMART LRR_sd22_2 200 226 - -
Bisa08g2005 1146 SMART LRR_sd22_2 176 197 - -
Bisa08g2005 1146 SMART LRR_sd22_2 537 560 - -
Bisa08g2005 1146 SMART LRR_sd22_2 417 446 - -
Bisa08g2005 1146 SMART LRR_sd22_2 561 597 - -
Bisa08g2005 1146 SMART LRR_sd22_2 658 683 - -
Bisa08g2005 1146 SMART LRR_sd22_2 513 536 - -
Bisa08g2005 1146 SMART LRR_sd22_2 152 175 - -
Bisa08g2005 1146 SMART LRR_sd22_2 369 395 - -
Bisa08g2005 1146 SUPERFAMILY Protein kinase-like (PK-like) 802 1087 IPR011009 -
Bisa08g2005 1146 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 62 235 - -
Bisa08g2005 1146 FunFam Putative LRR receptor-like serine/threonine-protein kinase 640 724 - -
Bisa08g2005 1146 Gene3D Ribonuclease Inhibitor 216 316 IPR032675 -
Bisa08g2005 1146 Gene3D Ribonuclease Inhibitor 62 215 IPR032675 -
Bisa08g2005 1146 SMART serkin_6 811 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2005 1146 MobiDBLite consensus disorder prediction 1091 1146 - -
Bisa08g2005 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Bisa08g2005 1146 FunFam Leucine-rich repeat receptor protein kinase EMS1 555 639 - -
Bisa08g2005 1146 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 887 1102 - -
Bisa08g2005 1146 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Bisa08g2005 1146 Pfam Leucine rich repeat 587 647 IPR001611 GO:0005515
Bisa08g2005 1146 Pfam Leucine rich repeat 515 574 IPR001611 GO:0005515
Bisa08g2005 1146 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Bisa08g2005 1146 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Bisa08g2005 1146 Gene3D Ribonuclease Inhibitor 317 396 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2005 Bisa-ChrBisa08 48153009 48156918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2005 61 1136 Receptor kinase-like Gene Family AT5G56040 53.431 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa08g2005 Pkinase 1e-39 CL0016