Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1985 ATGCCCCATAACTGACACAGGAATATGTTTGAAGGGCACAATGCCTATTCCATGTTCCCCTCTTCTATTGGGGGAAACAGATTGCAGTATGATACTGATGGACTGCCTCAACTCCAGTTATTTGGAGACTTTCCAGTTGGTTGCAGCGTTGGTTCCTTAAACTATGTGGGAGGTGAGCATAATCCAGTGATGGAAACAATGAAAGGAGATATAGAGGTAGGACCTTTTTCTAGACAGCCAAAGTTTCCGATATCACAAAATAACGAGTCTTTTCAAGATAATGTCGGTCATTCTGGTTATGCTCCAAATGCGGTTTCTACTGGTCTGAGGCTTTCATACGAGGAAGATGAACACAATTCTTCCGTCACTTGTGCTAGTGAAGTCATTAAAGCTGCGCTTCCTATAATTTCATCCCTTGGTGATAATCTTAAGGTTCAGATTGATCAGCAGATAAAAGAGCTTGATTGTTATATCAAGTTTGAGGGGGAAAACATCATCAAAGGTCTGGGAGAACTGAGGCAAAGACACATGGTTTCCTTTCTTAGTGCCATTGAGAAAGGAGTTAGCAGGAAGTTATATGAGAAAGAGCTAGAAATAGAGAACATTAACCACAAGAACAAGGAACTACTAGCGAGGATAAAGCAGGTTAGCATGGAAGTTCGGTCCTGGCACTACAGGGCGAAATATAATGAATCTGTTATTAATGTCTTGAAGAACAACTTACAGCAAGTCATGGCACAAGGTGTTATGCATGGAAAGGAAGCTTGTGGTGAAAGTGAAATAGAGGATGCGGCCTCACGTACGAATGTAAATTATCTAGGAGCTCCACAGCATACTGGAGATTTGAATCCCTTGAAGAACAAGATGAATTGCAGGGCTTGCAAAGGTAAGGAAATATCTGTTCTAATGTTGCCTTGTAGGCACTTGTGTCTGTGTAAGGATTGTGAAGCGTTTATTGATGTATGCCCTATCTGCGGAATAATGAAGACTGCGAGCGTTGAAGTATTCTTGTCATAG 1017 0.4149 MPHNXHRNMFEGHNAYSMFPSSIGGNRLQYDTDGLPQLQLFGDFPVGCSVGSLNYVGGEHNPVMETMKGDIEVGPFSRQPKFPISQNNESFQDNVGHSGYAPNAVSTGLRLSYEEDEHNSSVTCASEVIKAALPIISSLGDNLKVQIDQQIKELDCYIKFEGENIIKGLGELRQRHMVSFLSAIEKGVSRKLYEKELEIENINHKNKELLARIKQVSMEVRSWHYRAKYNESVINVLKNNLQQVMAQGVMHGKEACGESEIEDAASRTNVNYLGAPQHTGDLNPLKNKMNCRACKGKEISVLMLPCRHLCLCKDCEAFIDVCPICGIMKTASVEVFLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1985 338 Pfam Zinc finger, C3HC4 type (RING finger) 288 326 - -
Bisa08g1985 338 CDD mRING-HC-C3HC5_CGRF1-like 291 326 - -
Bisa08g1985 338 ProSiteProfiles Zinc finger RING-type profile. 291 325 IPR001841 -
Bisa08g1985 338 MobiDBLite consensus disorder prediction 80 97 - -
Bisa08g1985 338 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 275 337 - -
Bisa08g1985 338 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 88 335 IPR017066 -
Bisa08g1985 338 Coils Coil 192 219 - -
Bisa08g1985 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 338 IPR013083 -
Bisa08g1985 338 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1985 Bisa-ChrBisa08 47704093 47706877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1985 288 327 C3H Transcription Factor Family AT1G73950 50.000 1.84e-06 47.4