Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1984 ATGCAGAGCACGGCTTTCAGTTTCTCTCCTTCTCTTCCTCTTCACAGACCTCGCAGACCATGTACCTCGAATCGCTTCGATCCTATTCGTCTCTCTGCTTCCTCTTCCAAGCCCTACGAAAGCGCTTCCTCTTCTTCCTCGTCTTTCCATCGCCGATCATGGCCCCTGGCTTCTTCTTATTCCTCTTCCTCCTCTTTTAAGTTCAGGCCCTCGACATCCTTGCCGAGCCCTTCCTCCGATTCCGACGCTACTCGCTTCGAGGCCCGGGCCACTTCCGTTCCCGAGAACGCCGATGGGAGCTCCAACGCCTTATCCCAAACGCTTGTGCTTGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTCAATATCTACAACAAACAGGTCTTGAAGGTGTACCAGTTCCCAGTAACCCTCACTCTGGTTCAATTTGCTGTTGGGTCTCTCCTTGTCTCATTCATGTGGATTTTTAATCTATATAAAAGGCCTAAAATAAGTGGATCCCAGCTTGCAGCTATACTGCCATTGGCTTTGGTACATACTTTAGGGAACCTATTCACTAATTTGAGTCTAGGCAAGGTGGCTGTGTCATTCACTCACACGATCAAAGCAATGGAGCCTTTCTTTTCAGTAGTCCTTTCTGCCATATTCCTTGGAGAGATGCCAACTGCATGGGTGGTTGCTTCTCTTTTGCCTATTGTTGGTGGAGTAGCATTGGCTTCAGTTACTGAGGTCACTTTTAATTGGGCTGGTTTTTGGAGTGCAATGGCATCCAATTTGACCTTCCAATCTCGTAATGTGCTTAGCAAAAAGGTCATGGTTAAGAAAGAGGAATCAATGGACAATATAAACCTCTTCTCAATAATAACCATTATGTCCTTCTTTTTGTTAGCACCTGTGACTGTCTTCATGGAGGGTATCAAATATACCCCTTCATACCTGCAATCTGCTGGGTTAAATGTTAGACAAATATACATCAGATCTCTTATCGCTGCACTCTGTTTCCATGCATACCAACAAGTTTCATATATGATATTGCAGAGGGTATCACCTGTGACCCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAGAACACCTGTCTCGCCGGTTAACGCATTTGGTACTGGTATAGCCCTTGCTGGAGTCTTCCTTTATTCAAGGGCAAAGCAAATTAAGCCAAAGCCTAAGACAGCTTAA 1233 0.4574 MQSTAFSFSPSLPLHRPRRPCTSNRFDPIRLSASSSKPYESASSSSSSFHRRSWPLASSYSSSSSFKFRPSTSLPSPSSDSDATRFEARATSVPENADGSSNALSQTLVLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTLTLVQFAVGSLLVSFMWIFNLYKRPKISGSQLAAILPLALVHTLGNLFTNLSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTAWVVASLLPIVGGVALASVTEVTFNWAGFWSAMASNLTFQSRNVLSKKVMVKKEESMDNINLFSIITIMSFFLLAPVTVFMEGIKYTPSYLQSAGLNVRQIYIRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFRTPVSPVNAFGTGIALAGVFLYSRAKQIKPKPKTA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1984 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 244 - -
Bisa08g1984 410 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 408 IPR004696 GO:0016020|GO:0022857|GO:0055085
Bisa08g1984 410 MobiDBLite consensus disorder prediction 1 86 - -
Bisa08g1984 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 318 402 - -
Bisa08g1984 410 Pfam Triose-phosphate Transporter family 109 398 IPR004853 -
Bisa08g1984 410 PANTHER SOLUTE CARRIER FAMILY 35 110 404 - -
Bisa08g1984 410 MobiDBLite consensus disorder prediction 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1984 Bisa-ChrBisa08 47691112 47697502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1984 1 410 Antiporters AT5G33320 72.289 0.0 555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1984 08 47691112 47697502 Bisa02g1289 02 21886005 21889181 CCT
Bisa08g1984 08 47691112 47697502 Bisa02g1289 02 21886005 21889181 ECH
Bisa08g1984 08 47691112 47697502 Bisa08g1984 08 47691112 47697502 ECH