Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1983 ATGGATCTTGAGACAAAGCTCTCATCACAAAACTATGACTTGCAAGAAATTGAGATGAAATCCGACATGAAAGACCTCGAGCTTCCAAATTTTGGGGTTCCTAATTCATCATCATCGCAGGGTAATAATAATTTCTTGCAGGAATTACTCCACATTGATCCATTTCAACCAAGTGGGTCATCCCAAAATTCCATCTTTGGTGTCCAAAACCCAAATTTTCAAACCTCATTGGATTATTTCACGTATGGGTGTTCATCAGCAGATTTTGACGTTTATGAGTCAAAGCCATTCGTTGGAAATAACGTTGTCAAAGGGCAATCCCAGGTTATGGACAATTTTCAGTACGGAGCTGGTGACAATTACAGTAATACCCTCAATCTTCCTCAGAGGAATATTAATCATCAAATTATGGAAATGATGGATTCAAATCAAAGTCAATATTATGTGCCTTTTGATCCTCAAGAAACCAAGCCTGTGATGAATTTCGTTGTGCCAGACGATGAAGTCTCATGCATATCTCCAGATCATAGTTTTTGCAGAAGAGTTGTATTGAATAGTAAAAATAACAGGACGTCGTCTCCATCGAGAAGGACATGCAAGATTCGAAACAAGTGCAACGTTGTCAAGGGACAGTGGACTGTAGAAGAAGATGGGTTGCTGATTCAACTGGTGGAACAATACGGAGTGAAAAAGTGGTCTCATATTGCTCGGAGTTTGCCTGGGAGAATAGGGAAACAGTGCCGAGAGCGATGGTACAACCATCTAAGGCCTGACATTAAGAAGGATACTTGGAGTAACGAAGAGGACAAGATACTGATAGAAGCTCATGCAGAGATAGGAAACAAATGGGCAGAGATTGCCAAGAAGTTGCCTGGAAGAACCGAAAACTCCATTAAGAACCATTGGAATGCCACAAAGAGAAGGCAATATTCAAAGAGAAAGTGTCGCTCAAAGTACCCTCGACCCTCTCTTCTTCAAGAATACATCAAGAGCTTGAACTTAGACAAAAACCCTCCCATAGATTATCGCAAAAGATCCTCTTTTTCTGCTAATAATAATCCTATGTTGACAAGCACGAGAAAAGGGACAGCAGCATCAGGATCAAGTGGTCAGTTTTGTCCAGACAATGACAGGGTGGTGCCTATTTATGATTTTAAGGAAGACCCGGATTTCTGTTTCGAAGAAAGTTTGAATCTTTTTCAAGAGGGGTGCAATATTGAGACTCTGCTTGATGACATGCCTTGTGGTGGTGATGATGTTGTTGTTAGTAAGCCATATGAGGGGGACGTTCAAGTGAAGAAGGAGATGGATTTGGTGGAGATGATGTCTCAGGTCAATGCAGTTGTTTGA 1350 0.4104 MDLETKLSSQNYDLQEIEMKSDMKDLELPNFGVPNSSSSQGNNNFLQELLHIDPFQPSGSSQNSIFGVQNPNFQTSLDYFTYGCSSADFDVYESKPFVGNNVVKGQSQVMDNFQYGAGDNYSNTLNLPQRNINHQIMEMMDSNQSQYYVPFDPQETKPVMNFVVPDDEVSCISPDHSFCRRVVLNSKNNRTSSPSRRTCKIRNKCNVVKGQWTVEEDGLLIQLVEQYGVKKWSHIARSLPGRIGKQCRERWYNHLRPDIKKDTWSNEEDKILIEAHAEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRPSLLQEYIKSLNLDKNPPIDYRKRSSFSANNNPMLTSTRKGTAASGSSGQFCPDNDRVVPIYDFKEDPDFCFEESLNLFQEGCNIETLLDDMPCGGDDVVVSKPYEGDVQVKKEMDLVEMMSQVNAVV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1983 449 MobiDBLite consensus disorder prediction 345 370 - -
Bisa08g1983 449 ProSiteProfiles Myb-like domain profile. 256 306 IPR001005 -
Bisa08g1983 449 ProSiteProfiles Myb-like domain profile. 204 255 IPR001005 -
Bisa08g1983 449 SMART sant 208 257 IPR001005 -
Bisa08g1983 449 SMART sant 260 308 IPR001005 -
Bisa08g1983 449 FunFam Transcription factor MYB119 262 326 - -
Bisa08g1983 449 Pfam Myb-like DNA-binding domain 212 270 - -
Bisa08g1983 449 CDD SANT 263 306 IPR001005 -
Bisa08g1983 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 259 IPR017930 -
Bisa08g1983 449 Gene3D - 208 260 - -
Bisa08g1983 449 PANTHER MYB PROTEIN-RELATED 181 344 - -
Bisa08g1983 449 CDD SANT 212 255 IPR001005 -
Bisa08g1983 449 SUPERFAMILY Homeodomain-like 206 302 IPR009057 -
Bisa08g1983 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 260 310 IPR017930 -
Bisa08g1983 449 FunFam Transcriptional activator Myb isoform A 208 261 - -
Bisa08g1983 449 Gene3D - 262 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1983 Bisa-ChrBisa08 47650759 47652929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1983 90 422 MYB Transcription Factor Family AT4G18770 49.419 5.72e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g1983 Myb_DNA-bind_6 7.1e-19 CL0123