Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1967 ATGAGGAATTTTTCCTGGTTTAAACAAGCTCGAAACAACGAGAAGTTGGGGAGAAAGCTTTCGCTTGGGGAATATAGGCGAGCTGTGTCATGGTCCAAGTACCTGGTCTCCTCCGGGGCTGCCATCAAGGAAGAAGGAGAAGAGGATTGGAGCGCCGATTTGTCCGAGTTACTCATTGGCCCCAAATTTGCTATTGGCAAGCATAGTAGGATCTACAAAGGCGTTTACAAGCACAAGGAAGTGGCAATCAAGATGATAAGTCAACCAGAGGAGGACGAGCACTTGGCTGCTATACTTGAGACGCAGTTTAATTCAGAGGTTTCCTTGCTGTTTCGATTGTGTCATCAAAATATCATTAAGCTTGTTGCTGCTTGCAAGAAACCTCCAGTCTTCTGTATAATTACTGAATATATGCCCGGGGAATCATTGAGAAAATACCTGCGTATGCAAAAACCATATTCAGTTCCGCTCAAACTTGTTCTGAAATTAGGCCTAGACATTGCACGTGGTATGCAATATCTTCATTCTCAGGGGATACTTCATAGGGATCTCAAGTCAGAAAATCTACTGTTGGGAGGAGATATGTGCGTAAAAGTAGCAGATTTTGGAATCTCATGTCCAGAATCCGAGTGTTTTACTGCTCATGAATTTACTGGAACTTATCGTTGGATGGCACCTGAAATGATGAAAGACAAGAATCATACAAAGAAAGCAGATGTCTACAGTTTTGGCATTGTTCTATGGGAGCTTCTAACAGCACTGACACCATATGAGGACATGAATCCAGAGCAGGCAGCATTTGCAGCTTTTCACAAGAATCTAAGGCCCGAATTGCCACCTGGATGTCCATTGGCATTTAGTAGTCTGGTCACCAGATGCTGGGCAGCCGATCCAGCAAAACGGCCATACTTTAATGAGATAGTTTCCATTTTGGAGAGCTATTCGGAATCCCTTAAGGAAGATCCAGAATTCTTCTCTAAATTCGTACCAGGGCCTCCTCCTACTAATAAAATTTTTTTGGGATGCTTACGAGAGTGTATTTCTGGCCGTATATCTGCTTCTTGGATAGCTTAA 1074 0.432 MRNFSWFKQARNNEKLGRKLSLGEYRRAVSWSKYLVSSGAAIKEEGEEDWSADLSELLIGPKFAIGKHSRIYKGVYKHKEVAIKMISQPEEDEHLAAILETQFNSEVSLLFRLCHQNIIKLVAACKKPPVFCIITEYMPGESLRKYLRMQKPYSVPLKLVLKLGLDIARGMQYLHSQGILHRDLKSENLLLGGDMCVKVADFGISCPESECFTAHEFTGTYRWMAPEMMKDKNHTKKADVYSFGIVLWELLTALTPYEDMNPEQAAFAAFHKNLRPELPPGCPLAFSSLVTRCWAADPAKRPYFNEIVSILESYSESLKEDPEFFSKFVPGPPPTNKIFLGCLRECISGRISASWIA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1967 357 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1967 357 Gene3D Phosphorylase Kinase; domain 1 45 139 - -
Bisa08g1967 357 Pfam Protein tyrosine and serine/threonine kinase 63 311 IPR001245 GO:0004672|GO:0006468
Bisa08g1967 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Bisa08g1967 357 Gene3D Transferase(Phosphotransferase) domain 1 142 327 - -
Bisa08g1967 357 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 314 - -
Bisa08g1967 357 CDD STKc_MAP3K-like 64 311 - -
Bisa08g1967 357 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1967 357 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Bisa08g1967 357 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Bisa08g1967 357 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Bisa08g1967 357 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Bisa08g1967 357 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Bisa08g1967 357 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1967 Bisa-ChrBisa08 47292069 47294761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1967 30 348 MAP Kinase Kinase Kinase AT1G62400 55.280 1.38e-121 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa08g1967 PK_Tyr_Ser-Thr 8.3e-62 CL0016