Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1960 ATGAAGGAGGCGAATGATGGGTTTCTGAGGGCGGATCAGATTGATCTGAAGAGCATAGATGAGCAGCTCGAGAGGCATCTCAACAAGGCATTGACCTTGGAGAAGCACAAGACTAAAGAGGAAGATGCGCCGACTACTATCATCGGCGGCGCTACTGCCGTTAAAAGCTTAAGCAGTGGTGGTGGAGCTACCTACAAGAGACAAAGGCAGGAGTGGGAGATTGACCCTTCGAAGTTAATCATCAAGAGTGTTATAGCTCGCGGAACTTTCGGCACAGTCCACCGTGGCGTCTACGACGGCCAAGATGTCGCCGTTAAATTGTTGGATTGGGGTGAAGAAGGACACAGGACAGATGCTGAAATTGCTTCATTAAGGGCAGCGTTTACACAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCTAACGTCACTAAGTTCATAGGGGCAACGATGGGGTCAGCAGAATTACAGATACAAACTGAAACTGGTCTAGTTAGCATGCCTAGCAATATCTGTTGTGTTGTGGTGGAGTATCTCCCTGGGGGTGCACTAAAATCTTACCTAATAAAGAACAGGAGGAGGAAGTTACCATTTAAGGTTGTCATTCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGCTATTGGATAAGACACGTGCTGTAAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCTTCAAACCCTAATGACATGACTGGGGAGACTGGCACTCTTGGTTACATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGACGTGTACAGTTTTGGCATCTGTTTGTGGGAGATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGGTTACTTCAGCCGTTGTTCGCCAGAACCTGAGACCAGACATACCAAGATGCTGTCCCAGTTCTCTAGCAAATGTAATGAAGAGATGCTGGGATGCTAATCCCGATAAGCGACCGGAGATGGACGAGGTAGTTTCCATGATAGAGGCCATTGACACATCAAAAGGTGGAGGTATGATCCCCGTTGATCAGCAGCAAGGTTGTCTTTGCTTCCGCAAGTGTAGAGGGCCCTAA 1149 0.4656 MKEANDGFLRADQIDLKSIDEQLERHLNKALTLEKHKTKEEDAPTTIIGGATAVKSLSSGGGATYKRQRQEWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRTDAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGSAELQIQTETGLVSMPSNICCVVVEYLPGGALKSYLIKNRRRKLPFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRAVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPDIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMIEAIDTSKGGGMIPVDQQQGCLCFRKCRGP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1960 382 Gene3D Phosphorylase Kinase; domain 1 67 163 - -
Bisa08g1960 382 Gene3D Transferase(Phosphotransferase) domain 1 179 371 - -
Bisa08g1960 382 SUPERFAMILY Protein kinase-like (PK-like) 64 352 IPR011009 -
Bisa08g1960 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 65 356 - -
Bisa08g1960 382 Coils Coil 16 36 - -
Bisa08g1960 382 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1960 382 Pfam Protein tyrosine and serine/threonine kinase 81 352 IPR001245 GO:0004672|GO:0006468
Bisa08g1960 382 FunFam Serine/threonine-protein kinase HT1 179 364 - -
Bisa08g1960 382 SMART serkin_6 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1960 382 CDD STKc_MAP3K-like 85 353 - -
Bisa08g1960 382 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Bisa08g1960 382 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Bisa08g1960 382 PRINTS Tyrosine kinase catalytic domain signature 176 189 IPR001245 GO:0004672|GO:0006468
Bisa08g1960 382 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Bisa08g1960 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Bisa08g1960 382 FunFam Kinase suppressor of Ras 1 68 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1960 Bisa-ChrBisa08 47117175 47120212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1960 1 314 MAP Kinase Kinase Kinase AT5G50000 82.965 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa08g1960 PK_Tyr_Ser-Thr 9.6e-63 CL0016