Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1954 ATGGTGGCAACATCATGCACGAATTTGTTGCACTTGTTGTCGGGGAACATTATAAAAGCCCCTCAAACTCACAGAGTTCTTCCGCGCGTTATGACAGCTCCTGGAGTTATGTCTGATGTAGATGGAAAACAAAGTACCGATGATGATGATTTAGATGCTCTCTCATTAGAAAACCGTCAGAAGATAATTGTTGTGGCAAATTTTCTTCCTCTCAATGCTCAAAAGGACAAAAGATCTGGCAGATGGTGCTTTAGTTATGATGAAGATTCAATTCTGTTGCAGCTAAAGGACGGCATCTCGTCTGATACCGATGTTGTTTATGTGGGATCTCTGAAGGTTGATGTTCATGAAAGTGAACAAGAGAAAGTTTCTACTGAGTTGCTTGAGGAATTCAAATGCTTGCCTACCTTCCTTCCTTTGAACATCCAGAAACAGTTTTATAATGGATTCTGCAAGCAACATTTGTGGCCTCTATTTCATTACATGTTACCTATGTTTCCTGATTATGGCAATCGCTTTGATAGGTCGCTCTGGCAGGCTTATGTTTCTGCCAACCAGATATTTGCAAAAAAGGTTATGGAGCTTATCAATGCTGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTTCTCCCAACATTTCTTCGGAGGAAGTACAGCCGGATCAAGCTAGGATTTTTCCTTCACAGTCCATTTCCTTCATCAGAAATTTATCGGACTCTGCCTGTCAGAGATGAGATTCTGAAAGGACTTCTTAATGCAGATTTAATTGGGTTTCATACATTTGATTATGCTCGCCATTTTCTATCTTGCTGCAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAGAGGTTACATTGGGCTTGAATACTTTGGCCGCACAATATACATTAAAATCTTGCCTGTGGGAATTCATATGGGTCGACTTCAGTCTGCCCTAAATCACCCATCTTCTTCCGTCAAGGTCAGAGAAATCCGTGAGCAGTTTGAGGGGAAAACACTTATTCTTGGTGTTGACGATATGGACATATTCAAAGGCATCAGTCTAAAGCTCTTAGCTATAGAACAACTCCTTCAGCAGAACCCAGAACTGCAAGGTAAATTAACTCTTGTCCAAATTGTAAATCCCGCAAGGAGTTCTGGCAAAGATGTTCAAGAAGCAAAGAACGAAATGCACATTATTGCCAAAAGGATAAATGAAATGTTTGGTTTGCGGAATTATGAACCTGTAGTCATCATAGACCGTCCTGTTCCATTTTACGAGAAGACAGCCTATTATTCCTTGGCAGAATGTTGCATTGTAAATGCAGTGAGGGACGGCATGAATTTAATTCCGTACAAGTATATTGTCTGCAGGCAAGGGAATACAAAATTGGATGAAGCCTTAGGAATTGCTTCAGAGTCCCCTCATACAAGTGCACTTGTTGTTTCTGAGTTCATTGGTTGCTCGCCATCACTTAGCGGGGCATTGAGGGTGAATCCATGGGACATTAGTGCTGTGGCTGATGCAATCAATTTGGCCATCACAATGCCCATTGTAGAGAAACAGTTGCGGCACGAGAAACATTATCGATATGTTAGCTCTCACGATGTGGCTTATTGGACTCGAAGTTTCTTACAAGATCTAGAGCGTGCATGCCAGGATCACTACAGCAAATGTTGTTGGGGCCTTGGCTTTGGACTAGGTTTCAGAATCTTGTCCCTTTCTCCTAGTTTTAAGAAGCTGTCTGTAGGCCATGTTGTCTCTGTATATAAAAGGTCAAATCAACGGGCAATATTTTTGGACTATGATGGTACAATTGTGCCCAAATCTTCCATTGTTAAAAGCCCCAGATCCAAAGTTATCTCTGTTCTAAATAACTTATGCAGTGACCCCAGGAACACTGTGTTTATAGTTAGTGGCAGGGGAAAGACCTCATTGAGTGAGTGGTTCGATCAGTGTGAGAATCTTGGAATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAACAGTCAAGTTGGGAAACAAACCATATAGCTACAGATTTTGCTTGGAAAAGTATTACTGAACCTGTGATGAGATCATATACTGAGGCAACAGACGGATCTTATATTGAGACCAAGGACAGTGCCTTGGTTTGGCACTATTCTGATGCCGATCCTGATTTCGGATCTTGGCAGGCCAAGGAGCTGCTGGATCACCTTGAAAGTGTCCTTGCAAGTGAACCAGTTGTTGTTAAGAAGGGAGATAATATTGTTGAAGTTAAGCCACAGGGGATTACAAAGGGGTTAGTTGCAGAGGAGGTTCTGTCTACACTGACTCGAAACGGGAAATCGCCAGATTTCATTCTGTGCATTGGGGATGACAGGTCTGACGAAGACATGTTTGAGAGCATATCAGACAAATTCTACAGAACATCCTCTTCAGCACCAGAAATCTTTGCTTGCACCGTTGGTCAAAAACCGAGCAAAGCCAGGTATTACCTAGACGATACTGCAGATGTGATGCTGTTACTTCGTGGCCTTGATGATGCAGCATCAAGGCCTAAACCAAAACGTTCTGAAGAAGTCCCTTCTGAAGGAACGGAAGCTTGTTTCGAAACCATTGCTGAAAGACAAAGTGAAATGAAATAG 2625 0.4194 MVATSCTNLLHLLSGNIIKAPQTHRVLPRVMTAPGVMSDVDGKQSTDDDDLDALSLENRQKIIVVANFLPLNAQKDKRSGRWCFSYDEDSILLQLKDGISSDTDVVYVGSLKVDVHESEQEKVSTELLEEFKCLPTFLPLNIQKQFYNGFCKQHLWPLFHYMLPMFPDYGNRFDRSLWQAYVSANQIFAKKVMELINAEDDYVWVHDYHLMVLPTFLRRKYSRIKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIYIKILPVGIHMGRLQSALNHPSSSVKVREIREQFEGKTLILGVDDMDIFKGISLKLLAIEQLLQQNPELQGKLTLVQIVNPARSSGKDVQEAKNEMHIIAKRINEMFGLRNYEPVVIIDRPVPFYEKTAYYSLAECCIVNAVRDGMNLIPYKYIVCRQGNTKLDEALGIASESPHTSALVVSEFIGCSPSLSGALRVNPWDISAVADAINLAITMPIVEKQLRHEKHYRYVSSHDVAYWTRSFLQDLERACQDHYSKCCWGLGFGLGFRILSLSPSFKKLSVGHVVSVYKRSNQRAIFLDYDGTIVPKSSIVKSPRSKVISVLNNLCSDPRNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFIRWGKQSSWETNHIATDFAWKSITEPVMRSYTEATDGSYIETKDSALVWHYSDADPDFGSWQAKELLDHLESVLASEPVVVKKGDNIVEVKPQGITKGLVAEEVLSTLTRNGKSPDFILCIGDDRSDEDMFESISDKFYRTSSSAPEIFACTVGQKPSKARYYLDDTADVMLLLRGLDDAASRPKPKRSEEVPSEGTEACFETIAERQSEMK 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1954 874 CDD HAD_TPP 594 834 - -
Bisa08g1954 874 NCBIfam trehalose-phosphatase 591 837 IPR003337 GO:0003824|GO:0005992
Bisa08g1954 874 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Bisa08g1954 874 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Bisa08g1954 874 SUPERFAMILY HAD-like 593 837 IPR036412 -
Bisa08g1954 874 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Bisa08g1954 874 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Bisa08g1954 874 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Bisa08g1954 874 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Bisa08g1954 874 NCBIfam HAD-IIB family hydrolase 594 796 IPR006379 -
Bisa08g1954 874 Gene3D - 723 853 IPR023214 -
Bisa08g1954 874 Gene3D - 592 706 IPR023214 -
Bisa08g1954 874 Gene3D Glycogen Phosphorylase B; 54 313 - -
Bisa08g1954 874 Pfam Trehalose-phosphatase 596 829 IPR003337 GO:0003824|GO:0005992
Bisa08g1954 874 Gene3D Glycogen Phosphorylase B; 314 530 - -
Bisa08g1954 874 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 840 IPR001830 GO:0003824|GO:0005992
Bisa08g1954 874 FunFam Trehalose-6-phosphate synthase 10 723 851 - -
Bisa08g1954 874 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1954 Bisa-ChrBisa08 46987699 46990520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1954 1 866 Trehalose Biosynthesis Gene Families AT1G23870 66.551 0.0 1258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1954 08 46987699 46990520 Bisa02g1330 02 22698331 22702047 CCT