Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1948 ATGCCCAGCTTTCCATTGCAAAAAGGTGATAGCTTGAAGTACACATCCTCTGAATCTCCTCTCTCTTCATTCCAAACTCCTTCTTATAATGAAAGAGAATCATCTCCTTCTTCATCAGTAAGCAGAATCAGCCCACTCATCTTACTAGTCATAATAGTTCTAGCAGTCATCTTCTTCGTCTACGGAATCGTCCATTTGGTTCTCTGGTTTCTGATGAAAACTCCGTCTTCATCTTCGCCTCTGCACCAATCCAACAGATTCGAAGAATCCACGCGCTCGCGTGCGCTTCAAAGGCAGCTTCATCATCTCTTTCGCTTGCACGACTCAGGTCTGGAACAATCCCTCATAGATTCCCTTCCTGTGTTCTTCTGCGAAGATGTCTTGGGATTGAAAGAACCGTTTGACTGTGCTGTCTGTCTGTGTGAATTCTCAGATCGTGACAAGTTAAGGTTGTTGCCAATGTGCAGCCATGCCTTTCACATCAACTGTATCGACACGTGGCTCCTGTCAAACTCCACGTGTCCTCTCTGCAGAGCGACTATCTCATCAAGCTCTGGTCTTTCCATGGAAAACCCATTATTTGAAAATTCATGGGTTTTGAACAGATTCACAGGAGATGAAGAGAATGTGAATGGGTGTTCAGATGGGGAAGATCAGATTAGTGAAAAAAGGGTTTTTTCTGTGAGACTTGGGAAGTTCAGAAACGTCAATGGAGTAAATGATGGTGGTGGAGATGAGGATAGTAACAGTAGTGGTAGCAGCAGCAGCTGTAATTTGGATGCGAGGAGATGCTTCTCCATGGGGTCGTATCAGTATGTGGTGAGTGGTTCGAATCTGCAAGTGGTTTTCTGTGGTGGTGAAAGAAATGAGGATGGTGATGGAAAGAGGATAGGAGAAAGAAGCAAAGGTGAGAGCTTCTCTGTTTCGAAGATCTGGCTTTGGTCCAATAAGAGCAGGTTTCATGGGTCTTGTAATGGTGATTTCCCTCGAGTACTGTAA 999 0.4464 MPSFPLQKGDSLKYTSSESPLSSFQTPSYNERESSPSSSVSRISPLILLVIIVLAVIFFVYGIVHLVLWFLMKTPSSSSPLHQSNRFEESTRSRALQRQLHHLFRLHDSGLEQSLIDSLPVFFCEDVLGLKEPFDCAVCLCEFSDRDKLRLLPMCSHAFHINCIDTWLLSNSTCPLCRATISSSSGLSMENPLFENSWVLNRFTGDEENVNGCSDGEDQISEKRVFSVRLGKFRNVNGVNDGGGDEDSNSSGSSSSCNLDARRCFSMGSYQYVVSGSNLQVVFCGGERNEDGDGKRIGERSKGESFSVSKIWLWSNKSRFHGSCNGDFPRVL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1948 332 SMART ring_2 136 177 IPR001841 -
Bisa08g1948 332 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 38 312 - -
Bisa08g1948 332 MobiDBLite consensus disorder prediction 9 39 - -
Bisa08g1948 332 FunFam E3 ubiquitin-protein ligase ATL6 99 184 - -
Bisa08g1948 332 Pfam Ring finger domain 135 178 IPR001841 -
Bisa08g1948 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 186 IPR013083 -
Bisa08g1948 332 CDD RING-H2_EL5-like 135 178 - -
Bisa08g1948 332 SUPERFAMILY RING/U-box 115 184 - -
Bisa08g1948 332 MobiDBLite consensus disorder prediction 1 39 - -
Bisa08g1948 332 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1948 Bisa-ChrBisa08 46938196 46939194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1948 41 327 C3H Transcription Factor Family AT2G18650 43.027 1.95e-59 195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1948 08 46938196 46939194 Bisa08g1948 08 46938196 46939194 ECH