Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1943 ATGGTTCTCGTTGGGTATGGTTTTCTTGGCTATATGGATGGTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAACCACCTCAAAAGAGCCCACCTTTCATTGGAATAATTCGTTCACTGGCAGTTGGTAAAGAGGGTAAATTGAAGTTAGTTGTTAATTGGCTTTATCGATCTACTGAAGTGAACCTCGGCGAAGGTCTCCTATTGGAGGCTGCCCCAAACGAAATTTTCTACTCCTTTCACAAGGATGAGATTCCTGCTGCATCATTTCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGATTTCGTCATTTGTGTGTAGGAGAGTTTATGACATTCAGAACAAGTGTTTATGGTGGCTAACTGACCAAGATTATATTAATGAACGCCAAGAAGAAGTTGATCAGCTATTATACAGGACCCGAATAGAAATGCATGCAACAGTACAACCTGGTGGTCGATCTCCTAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGGTCAGATAGTGTCCAGAATAGTGCTTCTTCTTTTCCTTCTCAAGTTAAGGGTAGGAAAAGGGAGAGGGTAGATCAAGGGTCTGATCCCGTGAAAAGAGAACGGACAACAAAAATTGAGGATGGAGATTCTGGTCATTCTAGGCAGGAAAGCATTGTAAAGACAGAGATTGCCAAAATTACAGAAAAGGGAGGGCTTGTTAATACAGAAGGGGTTGAGAAACTAGTGCAGCTCATGAGTCCTGATAGAAATGTGAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCAGCTGTAATTGCAGCAACTGATAAGTTTGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCCGTATATGATGAATGGCTCCAAGAGGTTCATAAAGGGAAGATTGGTGATGGAAGTGGTTCTAGGGATGCTGATAAATCTGTTGAGGAATTTCTCTTGATATTACTCCGGGCCCTCGATAAGCTTCCTGTAAATCTCCAGGCTCTGCAAACATGTAACATTGGTAAGTCTGTGAATCATTTACGTACTCATAAAAACTCAGAAATCCAGAAGAAAGCTAGGGGGTTAGTTGACACGTGGAAGAAACGTGTCGAAGCTGAAATGAACATTAATGAATCAAAATCTGGTTCGGGTCAGACTGTTCCCTGGCCTACTAGAACACGGCTTTCTGAAGTTTCTCAAGGTGGGAATAGAAATTCTGGTGGGTCATCTGATGTTGCCGTGAAGAGCTCAGTTACGCAGCTCTCTGCATCCAAAACGGCCTCTGTGAAGATTGCCCAGGGAGAGAATGCTACCAGAGCTGCATCGCCAGGGTCTATGAAGTCAGTGCCCTCACCAACTTCTGCAACAGTGAGCTCAAAAGATGGACAGCCCCGTGCTGCTGGTCTCAGTGGAGCATCTGATGTTCCTATGGCAAATGCAAAGGAAGAGAAAAGTAGCAGTTCTAGTCAATCTCATAATAACAGCCAATCTTGTTCCAGTGAGCATGCTAAAACTGGGGGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCCACTGCGATGAGTGTGAATAAAATATCAGGCTGTTCTTCACGGCACCGAAAGTCTAGTAATGGAATTCCGGGCTCAACTCCTTCTTTAGGGCAAAGGGAGACTGGGCGAACTTCCTCCTTGCACAAGAATTCAACTGCAGAAAAATTTTCACAATCTGGATTCACAGAAAAGGCACTTGATGGGACTTCTCTTGAGGGAGGCACTCCCAAGCTGATTGTTAAGATTCCAAATCGAGGTCGAAGTCCGGCAGAAAGTGCCAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAACTGTCAAACTTCATCTCCTGTCCTTTCAGAGAAGAATGATCAGTTTGATCATAGCTCAAAGGAAAAGATAGACTTCTATAGAGTTAATAGTGGTTCAGATATTAATACCAAGCCTTTGCAGGGTAATGATTTTAAAGATGTACAAACAGGGTCTGATGAGGGTGATGGATCAACTGCTGCTATTACTGATCAAGAGCGCTGTAGGACTGTTGATGATTCTAAGAAAATGGTGGAAACATCAAAAGCTGCTTCCTCATCTTCTGGAAATGAAAATAAAGTAGTGAATATGCAGGATGCTTCTTTCAGCTCCATAAATGCATTAATAGAAAGTTGTGTAAAGTATTCTGAAGCTAATGCTTCTTTGTCAGCTGTTGATGATGTGGGAATGAATCTTCTTGCTAGTGTGGCAGCTGGAGAGATATCCAAATCTGAGCTGGCGACCCCAGCTGGATCACCAGAAAGAAACACCACTATAGTTGAACAGTTATATACTGTCAAGGCCTCTGAAGAAAAACTTGCTCAGCATGAATGTCATGTGAATAATGACATTGAGGAACATAAGAAGCAGGATAATACATCTGGGAATTCATGTGGAAACAATGGTGATAATGATTCTGGTTTGCTGGCATGTGAAGTGAAAGTTTCTGAAGCGCCCAATAGGCATATTACTTCATCTAGTAAGGATTTGCAGCGGGTTCCAGAAACTTGTTTAGAAAGCAAAGAAAAATGTAGTGAAATTCCAGTTGCTGCTTCATTCGCTGAGTTTCCTGGAAGCACCATCCAAGATTCCAGAGACAGCGACTGTCATAAACAGCTCAAGGATAACGTACTTGTTGGGGTTGTTAATGTAGGTGGAAATCTTGATGTTAAAGTTGATGATGATGCAAGAGAAGTTGAGATGGATGCTATGGAAAAATTATCACAGCCTTCTGTTGAAGTTGATATTAAAGGTGATAATTGTACAACTGAGGGATTAAGCAGTGGTGGACAAAATGCACTGAAGGTTCCTGTCACTGTCATGCAGTCCAATTTAGTAAAAGCAAGAGATGAGAATGTGCTACATGCTTCTGGTGATGGTGTTGTCAAGGCTGGAGAAGACCTCAGTGAAAGAGAATCCAAAAAGATAGATGATGTGGCTTCTCAAAATCATGTTAATCAGTCAGGAATGCAAAGAAATGAGTGTGAAAGTGATGCTGTGGTGCTGACCAAGAACAAAAGTAGAGCCGGTTTAGGTTCTGATGTCATCAGTAACGCTGCCGAATATGTTGAAGAGAATTCAGAAACAAAAGAGGTTGGTGACCAATATGTTGGACAAGAAATGGAGCAGCATCTAACTTCTAAAGGGGCAAAATTAACTGCCAAGGAAGCAGAGGAAGCTGAGGAGTGCACCTCTACCACTGCAGACACTTCTTCAATGTCTGCTGCTGGTGTGTCCAGTGCGGTGGATGCAAAAGTTGAATTTGATTTAAATGAAGGCTTCAGTGCAGATGATGGAAAATCTGGAGAGTTCAGTAGCATTGCCACCCCTGGATGTGCACCTGCTGTACGATTGATCAGTCCTGTGCCATTTCCTGCTTCAACCATGTCTAGTGGTATTCCTGCTTCAATTACTGTGGCTGCTGCTGCAAAGAGGCCCTTTGTGCCTCCTGAAGACTTGTTGAAAACTAAAGGGGAGCTTGGTTGGAAGGGATCAGCTGCCACTAGTGCATTCCGGCCAGCTGAGCCTAGAAAAGTTGTGGAAATGTGTCCTGGTACATCGTCTGTCCCTATATCTGATGCTTCAGCTGGAAAGCAGAGCCGACAACTATTGGATATTGACTTGAATGTGGCTGATGAAAGGATACTTGATGATGTTGCCTCTCAAACATGTTCTCAGGCAGATGGTGTTTCTCGAGCAGCCAACAATTGTAATCAAGTGTGCAGTAAAACAATGACTCAAGTGTGCAGTAAAACAATGACTTCACCTGTTCGCTCCTCTGGAGGTCTTGGTCTTGACTTGAACCAAGTGGATGAAACTTCTGATTTGGGCAATTGCTCCACAAGCAATGGTCATAAAATGGATGTACAACATCTGCAGGTGAAACCATTGTCCAGTGGTCATCCAAGTAGAGAGGCAAGTGCCCTCAGGGACTTTGATTTGAACGACGGACCTGCAGTTGATGAAGTCAGCACGGAACCATCGTTCTTCCCTCACCATGCCAGAAGCAGTGTGCCACCACAACATCCTGTTTCGGGGCCTAGAACGAGTAATACTGAACTAGGGAGCTTCTCGTCATGGTTTCCTTCCACTGGGAACACCTATTCAGCTGTTACCATATCTTCAATTGTGCCTGACAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCACAAAGAATGCTTGGCCCTGCTACTGCTGGCAGCCCATTTGGATCCGATGTTTATAGGGGACCAGTGTTGTCATCTCCTGCAGTGCCTTATCCATCTGCGCCATATCAATATCCTGTCTTCCCTTTTAATTCCAGTTTTCCTCTCCCATCATCATCATTTTCAGGTGGTTCAACTACTTATGTAGATTCAACATCTGGTGGAAGACTTTGCTTTCCCACAGTAAATTCACAGTTGATAGGTCCTGCCAGTACAGTTTCATCCCACTACCCCAGGCCTTATATCTTTGGCCTTCCTGATGGTAGTGTTACCGCAGAGAGTAGTAAGAAATGGAGAGGGCAGGGTTTAGATCTTAATGCCGGTCCTGGAGGTCCAGACATAGAGGGGAGAGATGAGAGTTCAGCTCTTTTGCCAAGGCAACTTTCTGTTGCCAGTTCTCAGGCCATAGCTGAGGAGCAGCAAAGGATGTTCCAGCTGGCTGGTGTTCTTAAGAGGAAGGAACCTGATGGTGGATGGGATGGCTACAAGCAATCCTCATGGCAATAG 4791 0.4392 MVLVGYGFLGYMDGRKISVGDCALFKPPQKSPPFIGIIRSLAVGKEGKLKLVVNWLYRSTEVNLGEGLLLEAAPNEIFYSFHKDEIPAASFLHPCKVAFLPKGVELPSGISSFVCRRVYDIQNKCLWWLTDQDYINERQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASSFPSQVKGRKRERVDQGSDPVKRERTTKIEDGDSGHSRQESIVKTEIAKITEKGGLVNTEGVEKLVQLMSPDRNVKKIDLASRSMLAAVIAATDKFDCLSQFVQLKGLPVYDEWLQEVHKGKIGDGSGSRDADKSVEEFLLILLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINESKSGSGQTVPWPTRTRLSEVSQGGNRNSGGSSDVAVKSSVTQLSASKTASVKIAQGENATRAASPGSMKSVPSPTSATVSSKDGQPRAAGLSGASDVPMANAKEEKSSSSSQSHNNSQSCSSEHAKTGGFSGKEDARSSTAMSVNKISGCSSRHRKSSNGIPGSTPSLGQRETGRTSSLHKNSTAEKFSQSGFTEKALDGTSLEGGTPKLIVKIPNRGRSPAESASGGSFDDPSIMNCQTSSPVLSEKNDQFDHSSKEKIDFYRVNSGSDINTKPLQGNDFKDVQTGSDEGDGSTAAITDQERCRTVDDSKKMVETSKAASSSSGNENKVVNMQDASFSSINALIESCVKYSEANASLSAVDDVGMNLLASVAAGEISKSELATPAGSPERNTTIVEQLYTVKASEEKLAQHECHVNNDIEEHKKQDNTSGNSCGNNGDNDSGLLACEVKVSEAPNRHITSSSKDLQRVPETCLESKEKCSEIPVAASFAEFPGSTIQDSRDSDCHKQLKDNVLVGVVNVGGNLDVKVDDDAREVEMDAMEKLSQPSVEVDIKGDNCTTEGLSSGGQNALKVPVTVMQSNLVKARDENVLHASGDGVVKAGEDLSERESKKIDDVASQNHVNQSGMQRNECESDAVVLTKNKSRAGLGSDVISNAAEYVEENSETKEVGDQYVGQEMEQHLTSKGAKLTAKEAEEAEECTSTTADTSSMSAAGVSSAVDAKVEFDLNEGFSADDGKSGEFSSIATPGCAPAVRLISPVPFPASTMSSGIPASITVAAAAKRPFVPPEDLLKTKGELGWKGSAATSAFRPAEPRKVVEMCPGTSSVPISDASAGKQSRQLLDIDLNVADERILDDVASQTCSQADGVSRAANNCNQVCSKTMTQVCSKTMTSPVRSSGGLGLDLNQVDETSDLGNCSTSNGHKMDVQHLQVKPLSSGHPSREASALRDFDLNDGPAVDEVSTEPSFFPHHARSSVPPQHPVSGPRTSNTELGSFSSWFPSTGNTYSAVTISSIVPDRGDQPFSIVAPNGPQRMLGPATAGSPFGSDVYRGPVLSSPAVPYPSAPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSTSGGRLCFPTVNSQLIGPASTVSSHYPRPYIFGLPDGSVTAESSKKWRGQGLDLNAGPGGPDIEGRDESSALLPRQLSVASSQAIAEEQQRMFQLAGVLKRKEPDGGWDGYKQSSWQ 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1943 1596 Pfam BAH domain 16 124 IPR001025 GO:0003682
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 405 472 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 489 513 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 193 229 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 1337 1374 - -
Bisa08g1943 1596 Gene3D - 11 246 IPR043151 -
Bisa08g1943 1596 ProSiteProfiles TFIIS N-terminal domain profile. 305 382 IPR017923 -
Bisa08g1943 1596 SMART BAH_4 15 130 IPR001025 GO:0003682
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 653 688 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 405 714 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 162 192 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 156 229 - -
Bisa08g1943 1596 ProSiteProfiles BAH domain profile. 15 130 IPR001025 GO:0003682
Bisa08g1943 1596 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 284 393 IPR035441 -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 520 584 - -
Bisa08g1943 1596 CDD TFIIS_I 304 380 - -
Bisa08g1943 1596 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 12 1596 - -
Bisa08g1943 1596 Pfam TFIIS helical bundle-like domain 330 379 IPR017923 -
Bisa08g1943 1596 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 247 383 IPR035441 -
Bisa08g1943 1596 SMART TFS2_5 302 381 IPR003617 GO:0005634
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 617 636 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 1521 1548 - -
Bisa08g1943 1596 MobiDBLite consensus disorder prediction 637 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1943 Bisa-ChrBisa08 46900297 46905868 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa08g1943 BAH 1.7e-09 No_clan