Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1940 ATGTGGACAACCCCCACGCGTAGCAATCCGATTGTAAGCGCTGCTCCTGATGTTTCTTCTTCTCCGTCCTCGTCTTCAGCTAATTCTTTCTATAAGGACGGTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAGCCACCTCAAAAGTGCCCACCTTTTATTGGAATAATTCGTTCACTGACAGTTGGTAAAGAGAGTAAATTGAAGTTAGTTGTTAACTGGCTTTATCGATCTGCTGAAGTGAATCTCGGCAAAGGTCTCCTATTGGAGGCTGCCCCAAACGAAATTTTCTACTCCTTTCACAAGGATGAGATTCCTGCTGCATCACTGCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGATTTCATCATTTGTGTGTAGGAGGGTTTATGATATTGCAAACCAGAGTTTATGGTGGCTAACTGACCAAGATTATATTAATGAACTCCAAGAAGAAGTAGATCAGCTATTATCCAGGACTCGTATAGAAATGCATGCAACAGTGCAACCAGGCGGTCGGTCTCCTAAGCCAGTGAGTAGTCCAACATCATCACAGTTAAAACCAAGTTCAGATGGTGTCCAGAATAGTGCTTCTTCTTTTCCTTCTCAAGTTAAGGGTAGGAAAAGGGAGAGGGTAGATCAAGGGTCTGAGCCCGTGAAGAGAGAACGGACAATAAAGATTGAGGATGGAGATTCTGGTCATTCAAGACAGGAGAACATTTTAAAGACAGAGATTGCCAAAATTACACAAAAGGGAGGGCTTGTTAATACAGAAGGGGTTGAGAAACTAGTGCAGCTCATGGTTCCTGATAGAAATGTCAAAAAGATAGATTTGTCTAGCCGGTCAATACTTGCAGCTGTAATTGCAGCAACTGATAAGTTTGACTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCCGTATATGATGAGTGGCTCCAAGAGGTTCATAAAGGAAAGATTGGTGATGGAAGTGGTTCTAGGGATGGTGATAAATCTGTTGAGGAATTTCTCTTGGTATTACTTCGGGCCCTTGATAAGCTTCCTGTAAATCTCCAGGCACTGCAAACGTGTAACATTGGTAAGTCTGTGAATCATTTGCGCACTCATAAAAACTCGGAAATCCAGAAGAAAGCTAGGGGGTTAGTTGACACATGGAAGAAACGCGTTGAAGCTGAAATGAACATTAATGATGCAAAATCTGGTTCAGGTCAGACTGTTCCCTGGCATACTAGAACACGGCTTTCTGAAGTTGCTCAAGCTGGGAATAGAAATTTTGGTGGGTCATCTGATGTTGCCGTGAAGAGCTCAGTTACGCAGCTTTCTGCATCCAAAACGGCCTCTGTGAAAATTGCCCAGGGAGAGAATGCTCCCAGAGCTGCATCTCCAGGGTCAATGAAGTCAGTGCCCTCACCAACCTCTGCAGCTGTGAACCCAAAAGATGGACAGCCCCGTGCTACTGGTCTCAGCGGGTCTGATGTTCCTATTGCAAATGCAAGGGATGAGAAAAGTAGCAGTTCTAGTCAATCTCATAATAACAGCCAATCTTGTTCCAGTGACCATGCTAAACCTGGGGGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAATAAATTATCAGGCAGTTCTTCACGGCACCGAAAGTCTGTTAATGGAATCTCTGGCTCATCTTCATGTGCAGGGCAAAGGGAGTCTGGGCGAAATTCCTCCTTGCACAAGAATACAAATTCAGAAAAATTATCACAATCTGGATTAACAGAAAAGGCTCATGATGGGACTTCTCTTGAGGCAAGTACTCCCAAGTTGATTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCAAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAACAGTCGAGCTTCATCTCCTGTCATTTCAGAGAAGAATGATCAGTTTGATCATAGCTCAAAGGAAAAGATTGACTTATATCGTGCTAATATTGGCTCAGATGTTAACACTGAATACTGGCAGAATAATGATTATAAAGATGTATTGATTGGGTCTGATGAGGGTGATGGATCTCCTGCTGCTGTTACTGATGAAGAGCGCTTTAGGACTGCTGATGATTCTAAGAAAATGGTGGAAGCATCAAAAGCTGCCTCCTCGTCATCTGGAAATGAAAATAAAGCAGTGACTATCCGTGATGCTTCTTTCAGCTCCATAAATGCACTAATTGAAAGTGTAAAGTATTCTGAAGTTAATGCTTCTTTGTCAGCCGTTGATGATGTTGGAATGAATCTTCTTGCAAGTGTGGCGGCTGGAGAGATTTCCAAATCTGAACCGGCGACTCCAACTGGATCACCGGAAAGAAACACCACTACAGATGAACCATCATGCCCAGGCAATGCCATAGTCAAGGCCTCTGAAGAAAATCATCCTCAACTTGAATGTCGCATGAATAATGAAATTGAAGATCATAAGAAGCAGGATAATACATCTGGTGATTCATGTGCAAACAATAATGATAATGATTCAGGCTTTTTGGCATCTGAAGTGAAAGTTGCTGAAGAGCACAATAGGCACACTACATCTACTGTGGGTTCGCAGCGGGTTACAGAATCATGTTTAGAAAGCAAAGAAAATCTAAGTGAAATTCCTGTTGCTGCTTCTTTGGCTGAATTTCCTGAAAGCGCCATGCAAGAAGCCAGAGACAGTGACAGTAGCAAACAGTTCAAGGAGAAAAAGCTTGTTGGAATTGTTAATGCAGGTGGAGATCTTGATGTTAAAGTTAATGGTGCTGCAAGAGAAGTTGAGATGGAATCAATTGAAAAATCATTATCAAAACCCTCTGTTGAAGCTGATGCTAAGGGTGATAATTGCACAATTGAGGGATTAATTAGTGGTGGAGAAACAGTACCTAAAGTTTCTGACACTGTTATGCAGTCCAATTTAGTAAAGGGAACAGATGAGAGTGTACTCCATCCTTCTGATAATAGTGTTGATAAGGCTGCAGAAGACCTCAGTGAAAGAGAATCCAAAAAGACTGATGAAGTGGCTGCTCAAAATCTTGCTAGTCAATCTGCAATGCAAAAGAATGAGTGTAAAAGTGATGGTGTGATGATAACAGAGAACAGAAGTACAGCTGGTTTAGGTTCAAATTTCAATGGTCATGCTGCTGAGTGTGTGGAGGAGAATTCAGAAACAAAAGAGGTTCGTGACCAGCATGCTGGACAGGTCCTGCACAAAGCTTCACCGAGTTTTCCTTCACAAGAAATGGAGCAGCGTCTGGGCTCTAAATTGTCCAAATTAAATCCCGAGGAAGCAGAGGATGTTGAGGAATGCACCTCTACCACTGCTGATGCCTCTTCCATCTCTGCTGCTGGTGTGTCTGATGTGGTGGATGCAAAAGTTGAATTTGACTTAAATGAAGGCTTTACTGCAGATGATGGAAAATCTGGAGAGTTCAACAGCTCTGCCATGCCTGGTTGTGCACCTGCAGTACGATTGATCAGTCCTGTGCCATTTCCTGCTTCAACCATGACTAATGGTATTCCTTCCACAATCACTGTGGCTGCTCCTGCAAAGGGGCCCTTTGTGCCTCCTGAAGACTTGTTGAAAACTAAAGGGGAGCTTGGTTGGAAGGGATCAGCTGCCACTAGTGCATTCAGGCCAGCTGAGCCCCGAAAAGTTGTTGAAATGTCTCCTGGTACATCATCCGTTCCTATGTCTGATGCTGCAGCTGGAAAGAAGAGTAGACAACTATTGGACTTTGATTTGAATGTGCCTGATGAAAGGATACTTGATGATGTTGCCTCTCAGCCTTGTTCTCATCAGACAGATGGTGTTTCTCGCTCAGCCAACAACTGTGATCAAGTATGCAATAAAACTATGGCTTCACCTGTTCGCTGCTCTGGAGGTCTTGGTCTTGACTTGAACCAAGTGGATGAAACTTCTGATGGGGTCAATTGCACCATGAGCAATGGTCATAAAATGGATGTACAGCATCTGCAGGTGAAACCGTCATCCAGTGGTCATCCAAGTAGAGAGGTAACTGCTCTCAGGGACTTTGATTTGAACGATGGACCTGCAGTTGATGAAGTCAACACGGAACCATCATTGGTCACTCACCATGCCAGAAGCATTGTGCCATCACAACCTCCTGTTTCTGGGCCTAGAACTAGTAATACTGAACTAGGGAGCTTCTCATCATGGTTCCCTTCCGCGGGGAACACCTATTCAGCTGTCACCATATCTTCAATTATGCCTGACAGAGGGGATCAGCCCTTTTCAATTGTTGCACCCAATGGACCACAAAGAATGCTGAGTCATGCTACTGCTGGCAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGTTGTCATCTCCTGCAGTGCCATACCCATCTGCTCCATATCAATATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCGTCATTTTCAGGTGGATCAACTACATATGTAGATTCAGCATCTGGTGGAAGGCTTTGCTTTCCTACAGTAAATTCCCAGTTAATAGGACCTGCCAGTACAGTTTCATCCCATTATCCCAGGCCTTGTGTCTTTAGCCTTCCTGATGGTAGTGGTACTGCAGAGAATACTAAGAAATGGAGAGGGCAGGGTTTAGATCTTAATGCTGGCCCTGGAGGTCCAGATATAGAGGGGAGAGATGAGAGTTCATCTCTTTTGCCAAGGCAACTTTCTGTTGCCAGTTCTCAGGCCCTAGCTGAGGAGCAGGCAAGGATGCTCCAGCTTGCTGGTGGTGTTAAGAGGAAGGAACCTGATGGTGGATGGGATGGCTACAAGCAATCATCATGGCAATAG 4872 0.4407 MWTTPTRSNPIVSAAPDVSSSPSSSSANSFYKDGRKISVGDCALFKPPQKCPPFIGIIRSLTVGKESKLKLVVNWLYRSAEVNLGKGLLLEAAPNEIFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGISSFVCRRVYDIANQSLWWLTDQDYINELQEEVDQLLSRTRIEMHATVQPGGRSPKPVSSPTSSQLKPSSDGVQNSASSFPSQVKGRKRERVDQGSEPVKRERTIKIEDGDSGHSRQENILKTEIAKITQKGGLVNTEGVEKLVQLMVPDRNVKKIDLSSRSILAAVIAATDKFDCLSQFVQLKGLPVYDEWLQEVHKGKIGDGSGSRDGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKSGSGQTVPWHTRTRLSEVAQAGNRNFGGSSDVAVKSSVTQLSASKTASVKIAQGENAPRAASPGSMKSVPSPTSAAVNPKDGQPRATGLSGSDVPIANARDEKSSSSSQSHNNSQSCSSDHAKPGGFSGKEDARSSTAMSVNKLSGSSSRHRKSVNGISGSSSCAGQRESGRNSSLHKNTNSEKLSQSGLTEKAHDGTSLEASTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVISEKNDQFDHSSKEKIDLYRANIGSDVNTEYWQNNDYKDVLIGSDEGDGSPAAVTDEERFRTADDSKKMVEASKAASSSSGNENKAVTIRDASFSSINALIESVKYSEVNASLSAVDDVGMNLLASVAAGEISKSEPATPTGSPERNTTTDEPSCPGNAIVKASEENHPQLECRMNNEIEDHKKQDNTSGDSCANNNDNDSGFLASEVKVAEEHNRHTTSTVGSQRVTESCLESKENLSEIPVAASLAEFPESAMQEARDSDSSKQFKEKKLVGIVNAGGDLDVKVNGAAREVEMESIEKSLSKPSVEADAKGDNCTIEGLISGGETVPKVSDTVMQSNLVKGTDESVLHPSDNSVDKAAEDLSERESKKTDEVAAQNLASQSAMQKNECKSDGVMITENRSTAGLGSNFNGHAAECVEENSETKEVRDQHAGQVLHKASPSFPSQEMEQRLGSKLSKLNPEEAEDVEECTSTTADASSISAAGVSDVVDAKVEFDLNEGFTADDGKSGEFNSSAMPGCAPAVRLISPVPFPASTMTNGIPSTITVAAPAKGPFVPPEDLLKTKGELGWKGSAATSAFRPAEPRKVVEMSPGTSSVPMSDAAAGKKSRQLLDFDLNVPDERILDDVASQPCSHQTDGVSRSANNCDQVCNKTMASPVRCSGGLGLDLNQVDETSDGVNCTMSNGHKMDVQHLQVKPSSSGHPSREVTALRDFDLNDGPAVDEVNTEPSLVTHHARSIVPSQPPVSGPRTSNTELGSFSSWFPSAGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLSHATAGSPFGPDVYRGPVLSSPAVPYPSAPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLCFPTVNSQLIGPASTVSSHYPRPCVFSLPDGSGTAENTKKWRGQGLDLNAGPGGPDIEGRDESSSLLPRQLSVASSQALAEEQARMLQLAGGVKRKEPDGGWDGYKQSSWQ 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1940 1623 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1623 - -
Bisa08g1940 1623 Pfam BAH domain 36 146 IPR001025 GO:0003682
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1602 1623 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 475 489 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 213 244 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 693 731 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1 29 - -
Bisa08g1940 1623 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 267 403 IPR035441 -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 786 805 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1067 1112 - -
Bisa08g1940 1623 SMART BAH_4 35 150 IPR001025 GO:0003682
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1068 1083 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 508 531 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1024 1041 - -
Bisa08g1940 1623 Pfam TFIIS helical bundle-like domain 350 399 IPR017923 -
Bisa08g1940 1623 SMART TFS2_5 322 401 IPR003617 GO:0005634
Bisa08g1940 1623 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 304 413 IPR035441 -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 636 655 - -
Bisa08g1940 1623 Gene3D - 20 265 IPR043151 -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 542 607 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 702 721 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1543 1582 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 454 661 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 783 810 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 182 212 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1089 1103 - -
Bisa08g1940 1623 CDD TFIIS_I 324 400 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 1001 1023 - -
Bisa08g1940 1623 ProSiteProfiles TFIIS N-terminal domain profile. 325 402 IPR017923 -
Bisa08g1940 1623 ProSiteProfiles BAH domain profile. 35 150 IPR001025 GO:0003682
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 174 244 - -
Bisa08g1940 1623 MobiDBLite consensus disorder prediction 992 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1940 Bisa-ChrBisa08 46786898 46793076 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa08g1940 BAH 8.8e-09 No_clan