Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1922 ATGGCGATCGCAGTTCCCAGTCGGCAGCTTTTCATCGATGGCGAGTGGAAAGAGCCGGTTCTCAAGAAACGAATTCCTATTATCAATCCCTCCACTGAATTGATAATTGGCGATATTCCTGCTGCTACTGCGGAAGATGTGGAGCTTGCAGTGGCTGCTGCCCGGAGAGCCCTGGTCCGGGAGAAGGGAAAACATTGGGCATCAGCTTCTGGGTCTGTTCGTGCTCGGTATTTGCGATCTATCGCTGCTAAGATAACAGAGAGAAAGTCTGAACTAGCAAAACTTGAAGCAATTGATTGTGGAAAACCACTGGATGAAGCATTATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTACGCTGACCTTGCTGAAGGATTGGATGCAAAGCAAAAGGCTCCCGTATCTCTTCCCATGCAAACCTTCAAAAGTCATGTTCTTAAGGAGCCCATTGGAGTTGTTGGATTAATTACTCCATGGAACTATCCTCTATTAATGGCTGTTTGGAAAGTTGCTCCTGCTTTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAATTGGCATCTGTTACCTGTTTGGAGCTGGGTCAAGTCTGTATAGACGTGGGCCTTCCTCCAGGTGTCTTGAATATTCTTACCGGATTAGGACCTGAAGCTGGTGCTCCTTTGGCATCACATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCTGTGACTGGGAGCAAGGTTATGACAGCTGCGGCTCAACTGGTCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGCCCAATTGTTGTTTTCGAGGATGTTGATCTTGATAAGGCTGCTGAATGGACCATCTTTGGCTACTCCTGGACAAATGGTCAGATGTGCAGTGCAACATCCCGTCTTATTGTACATGAAAGCATAGCTGGAGAGTTTTTGAAAAGGCTTGTGAAATGGATCAAAAATATCAAAATATCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGTCCAGTTGTTAGCAAAGGACAGTATGAAAAAATATTGAAGTTCATGTCAACAGCTAAGAGTGAGGGTGCAACTATTTTGACTGGTGGATCTCGCCCAGAGCATTTAAAGAAGGGGTTCTTTGTTGAACCAACCATCATAACTGATGTAACTACTTCTATGGAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGTGTAAAAACATTTCGAACTGAGGAAGAAGCTATTGAGCTAGCAAATGACACCGAATATGGCTTAGCCGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCATAACAAAGGCTTTTCGGGCAGGAATTGTATGGATCAATTGCTCTCAACCATGCTTCACCCAAGCCCCATGGGGAGGCACTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGATAACTACTTGAGTGTGAAGCAAGTGACTCAATATATATCTGATGAACCGTGGGGCTGGTACAAGTGTCCTTCAAAGCTGTGA 1512 0.4504 MAIAVPSRQLFIDGEWKEPVLKKRIPIINPSTELIIGDIPAATAEDVELAVAAARRALVREKGKHWASASGSVRARYLRSIAAKITERKSELAKLEAIDCGKPLDEALWDMDDVAGCFEYYADLAEGLDAKQKAPVSLPMQTFKSHVLKEPIGVVGLITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTCLELGQVCIDVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSVTGSKVMTAAAQLVKPVSLELGGKSPIVVFEDVDLDKAAEWTIFGYSWTNGQMCSATSRLIVHESIAGEFLKRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKILKFMSTAKSEGATILTGGSRPEHLKKGFFVEPTIITDVTTSMEIWREEVFGPVLCVKTFRTEEEAIELANDTEYGLAAAVISNDLERCERITKAFRAGIVWINCSQPCFTQAPWGGTKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYKCPSKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1922 503 PANTHER ALDEHYDE DEHYDROGENASE 4 502 - -
Bisa08g1922 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 282 - -
Bisa08g1922 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Bisa08g1922 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Bisa08g1922 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Bisa08g1922 503 SUPERFAMILY ALDH-like 5 489 IPR016161 GO:0016491
Bisa08g1922 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Bisa08g1922 503 Pfam Aldehyde dehydrogenase family 21 485 IPR015590 GO:0016491
Bisa08g1922 503 CDD ALDH_F10_BADH 27 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1922 Bisa-ChrBisa08 46196375 46207620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1922 1 503 Aldehyde Dehydrogenase Gene Family AT3G48170 80.716 0.0 868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1922 08 46196375 46207620 Bisa02g1348 02 23062460 23067521 CCT
Bisa08g1922 08 46196375 46207620 Bisa08g1922 08 46196375 46207620 ECH