Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1908 ATGAGAAACCACGGAGTAGTAGCAGATAAACCGACCATTAAATGCCACTCAAGAATCTCTTCCTCTCTCTGTCTTCTCATACTTGTACGGATTTACATTCATATTCCTCTCGCATACCTTAAACGCTTCAGCGAAGCAACTTCCGATCGGAGCATGTCTCTGTCTCCCATGCTCTCCGCCATCTCCACGGACGTCGATGCTTCGTCCGCCGCCGGCGAGATCATGCTCTTCGGCGTTAGAGTCGTGGTCGATTCCATGAGGAAGAGTGTGAGTATGAACGATCTATCGCAGTACGAACATCCTCAGGACGGCTCGAACAACACTAAAGATGTTCTCGCCGCCGGTTACGCCTCCGCCGACGAGGCCGTTCCTCATAACTCCCGCAAGCACTGCGAGCGGGAGCGCAAACGAGGGGTTCCATGGACGGAGGAAGAGCACAAACTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAAGGCGATTGGAGAGGGATCTCAAGGAACTTTGTGAAAACAAGGACTCCAACACAGGTTGCGAGCCATGCTCAGAAGTACTTCCTTCGAAAAAGCAACCTTAATCGCCGACGACGTAGATCCAGCCTATTTGACATTACCACTGACACGGTCTCGGAAATTTCAGTGGAAGAACAGATCCAGCATCAAGATAACATGCCTCATTCACATCTTGTGCACCCTGCAGCCCCTGAAACTAGCAACACCAATGGATTTTCTATGATGCCAGTATATCCAATGGGTGCTAGTTCCGGAATTTCATTCCCCAGTGGGAATCCAACGGAAAAGCTCACTCTGGGGCCAGAAAATTTCGAATTCATGGGGTCAATAAAGGTTGGCCGTCCAATTCCTGTTGTTCCAGATCCTAAGGCTGCTGCTGTGTCTGATATTGCCTCGAGTTCGAGCTCGGCTTTTGAGCCACCAGCACTGGCTCTTGGGCTATCCTTGTCGTCTGGTCAGAGAAAGACGTCATCAAGGCATTCAGGTTTACATGCAATGCCATGTTTCAATAATGGAGATAGCATCATAAGTGTTGCTTGA 1050 0.4971 MRNHGVVADKPTIKCHSRISSSLCLLILVRIYIHIPLAYLKRFSEATSDRSMSLSPMLSAISTDVDASSAAGEIMLFGVRVVVDSMRKSVSMNDLSQYEHPQDGSNNTKDVLAAGYASADEAVPHNSRKHCERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRKSNLNRRRRRSSLFDITTDTVSEISVEEQIQHQDNMPHSHLVHPAAPETSNTNGFSMMPVYPMGASSGISFPSGNPTEKLTLGPENFEFMGSIKVGRPIPVVPDPKAAAVSDIASSSSSAFEPPALALGLSLSSGQRKTSSRHSGLHAMPCFNNGDSIISVA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1908 349 ProSiteProfiles SANT domain profile. 136 189 IPR017884 -
Bisa08g1908 349 Pfam Myb-like DNA-binding domain 140 185 IPR001005 -
Bisa08g1908 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Bisa08g1908 349 Gene3D - 139 191 - -
Bisa08g1908 349 FunFam transcription factor MYB1R1 139 190 - -
Bisa08g1908 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Bisa08g1908 349 PANTHER TRANSCRIPTION FACTOR KUA1 70 271 - -
Bisa08g1908 349 CDD SANT 140 185 IPR001005 -
Bisa08g1908 349 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Bisa08g1908 349 SMART sant 137 187 IPR001005 -
Bisa08g1908 349 SUPERFAMILY Homeodomain-like 135 190 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1908 Bisa-ChrBisa08 45835533 45837562 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa08g1908 Myb_DNA-binding 3.2e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1908 08 45835533 45837562 Bisa02g1358 02 23295999 23297656 CCT