Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1901 ATGCCGCCTCACTCGGACCTTGACCATCAGATCGAGCACTTGATGCAGTGCAAGCCTCTGCCGGAAGCGGAGGTGAGGACGCTGTGCGAGCAAGCTAGGTCGATCTTGGTGGAGGAATACAATGTGCAGCCAGTGAAGTGTCCGGTCACTGTATGCGGAGACATCCATGGGCAGTTCCACGATCTTGTGGAGCTATTTCGGATCGGGGGAAGTGTTCCAGATACCAATTATCTTTTCATGGGCGACTATGTAGATCGAGGATACTATTCTGTCGAGACTGTAACACTTCTAGTGGCTCTAAAAGTACGTTATAGAGATAGAATAACAATTCTAAGAGGAAATCATGAGAGTCGCCAAATTACTCAAGTATATGGTTTTTATGATGAATGCTTGAGAAAATATGGGAATGCCAATGTCTGGAAGTATTTTACCGAACTTTTTGATTACCTACCGCTTACGGCCCTAATTGAGTCCCAGATTTTCTGCTTGCATGGTGGCCTTTCTCCCTCACTGGATACATTAGATAATATCCGTGCTCTGGACCGTACACAGGAGGTTCCTCACGAGGGACCAATGTGTGATCTCCTTTGGTCTGATCCAGATGACCGGTGTGGTTGGGGAATATCTCCTCGTGGTGCAGGGTACACATTTGGACAAGATGTTAGTTCAAATTTTAACCATACTAATGGGCTCACTCTTATTTCACGAGCTCATCAACTTATCATGGAAGGATACAATTGGGCCCAGGACAACAATGTGGTAACAGTGTTTAGTGCTCCGAATTACTGCTACCGATGTGGTAATATGGCTGCAATTCTTGAAGTTGGAGAGAGTATGGAACATAACTTCATCCAATTTGATCCAGCACCTCGACAGATTGAACCTGATACCAGTCGGAGAACTCCAGACTATTTTTTGTGA 921 0.4539 MPPHSDLDHQIEHLMQCKPLPEAEVRTLCEQARSILVEEYNVQPVKCPVTVCGDIHGQFHDLVELFRIGGSVPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTELFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRTQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDVSSNFNHTNGLTLISRAHQLIMEGYNWAQDNNVVTVFSAPNYCYRCGNMAAILEVGESMEHNFIQFDPAPRQIEPDTSRRTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1901 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Bisa08g1901 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Bisa08g1901 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Bisa08g1901 306 FunFam Serine/threonine-protein phosphatase 2 306 - -
Bisa08g1901 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Bisa08g1901 306 Gene3D - 3 306 IPR029052 -
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Bisa08g1901 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Bisa08g1901 306 SUPERFAMILY Metallo-dependent phosphatases 5 292 IPR029052 -
Bisa08g1901 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 306 IPR047129 GO:0004722
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1901 Bisa-ChrBisa08 45704750 45709517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1901 20 225 Calmodulin-binding Proteins AT5G63870 35.081 1.44e-30 115