Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1889 ATGGGGCATAAAAAGCGAAACCTTGCTCCACCTTCTAAAAAATCGGCGGCGGCGGTTTCTCTGGTGGCTCAATCTGCCATCGGTGGAGCCGCCAATGGTACCACTTCAGCCGAAGCCGACTTGTGCATGAATTCTTGTACCGCTCTTCAGAACAAAAATAGTAAGATCGAATTGTCTCCTCCTCCATGTGAGGGTTCGGCTTACTCCACAATCAAGCTTGAATGTGAGCGAGCCCTCAATGCGCTTCGGCGCGGTAACCACAACAAGGCACTGAGGCTTATGAAGGAGTCATGCTCCAGACATGACAGCTCGGTTTACTCGGCTTTAATTCACCGAGTTCAGGGCACCGTGTGTGTCAGAGTAGCGTCCATTATTGATGACCCAAGCGCGAAGCAACGACATTTGAAGAACGCAATTGAATCGGCACGCAAAGCAGTTGAGCTGTCCCCCAATTCTATTGAGTTTGCACATTTTTACGCCAATTTGATATATGAGGCAGCGAATGATGCGAACGAGTACGAGCAGGTGATGAAGGTGTGTGATAGGGCGCTTTCGATTGAAAACCCAACTGATCCTGCTAAAGTGAGCTTGCAGGATGAGAGCCAGCAGAAAATATCAACTGCGGAAGCCCGGATAGCACATGTGCAGAACGAGTTGCGGCAGCTAATCCAGAAGTCAAACATAGCTTCCTTATCGACTTGGATGAAAACTACTCTGGTTAATGGGGAGGAGAAATTTAGGTTGATTCCAATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTAGTTCAAACTAGAAGACCAAATGAGATCAAGAAGGTGACCAAGACACCAGAAGATAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGTTGCAGCAAAAGTCAGAGTCACCCCAAACTCAGAATGAAGGAGACAAGGCTGACAGAACATTGGATTCGTCTTTAGGATCTGGTCAGAGGATAGTTGATAGACGGAAGTATGGCAATATGCGAAAAAATGGCTCTACAGCCGAAAGGCTGGATTGGGTACGCTCATATTGGAATTCAATGAGTATTGATATGAAGAAGGACTTGCTTAGGATCAGGGTTTGTGATCTGAAGTCCCACTTTGCATCCTCAAAGGATACTTTGCTGAATGATGTTTTATCAGAAGCTTTGTCCTATGCCGAGGCCAATAAAACATGGAAATTCTGGCTTTGCTTCCATTGTAATGAAAAGTATTCAGATTTGGAAACTCACATGCAACATGTTGCGCAGGAACACATGGGAAATCTCTTGCCAAAAATGCAAAGACTCTTACCTCAAAATGTGGATAATGAGTGGATTGAAATGATTCTTAATTATTCTTGGAAGCCTCTGGATGTCTCAGCTGCAGTTAAAATGCTTGATGATCAAGCAAAATGCAAAGGCTCTACCTTCCTTGGGGGTTCCTACTTGGCTTATCATACTGAGGAGTATAGTGGTTGTTCTAAAGATGCAGGGGAATCTTATCCTGAGGAAGAAAATTTGAGACATAGTCTCCTTAATTGTACATCTGAAAGTAGTAAATATTACCAACTTTCAGAAAATGATATAAGTGAAGGTGTCCATGTCCAAGGACCTATGGCATTTCCTCTTGGTGGTGTTTGGCCAACTTCTGATGACTCTGAGCGAGCAAAAATTCTTGAGAAAATTCATGCACTATTTGAGATGCTTATTAGACACAAATATCTTGCTACTATTCATCTTAAGAAGGTCATACAGTTTACTGTGGATGAGATACAGAATCTTGCTACTGGTTCTCAGCTTCTAAGCCATGGTGTAGACCAAACACCAATGTGTATCTGCTTTCTTGGAGCTCCCCAGCTTAGAAAAATTCTCAAATTTTTGCAGGAATTGTCTCATGCTTGTGGTTTGGGTAGGTATGCTGAGAAAACCAGTAGTCCCATGGAAGATCTACAGAATCCTAGTCAGGGTTCTGGGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTGGATGAGTGTTTACTGTCAACAAAACTCACTTCTACCAGTACACAGGTTGCTGTCCTAGATGATGTGACTGCCCCAACTTCTGCTAATGGGTACGCTTTGCTGTCCTGGATATTTTCAGGTTCCTCTGGGGATCAGTTGACATCATGGACGCATATAGAAGAAGATAAAAGACATCAAGGAATGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACCTACAAAGCCTTTGTGAAAAGAAGTGTGAGCGTTTAAGTTGTGAGGAAGCTCTGCAGGCAGTGGAGGATCTTTGTCTCGAAGAAGGAAAGAAGAGGGAAAATGTAACAGTATTTGTTCGACAAAGCTATGAATCTATCTTAAGAAAGCGGAGAGAAGAGCTCTTTGAGATTGAGAATGATGTGATGTATGTTAGCAATAAGTTTGAGTTGGATGCTATATCAAATGTTCTGCAAGAAGCAGAAGCTCTGAATTCTAATCAATTTGGCTATGAGGAAACATGTGCTGGTGTGACCTCTAAGTTATGTGACATAGAATCTGGTGAAGAAGATGGATGGAGAATGAAGGACTCTGTGAATCAAATGGATAGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAACACTTGTCTTTGGAGCTTAACAAAATTGATGCACGAATAATGAGAAATGTTTCAGGGGTGCAACAATTGGAACTGAAGCTTGAGCCTGTCTCTGCTCATGATTATCGAGCAATAATGTTGCCTCTGGTGAAGTCATACCTAAGGGCACTTTTGGAAGATTTAGCTGAGAAAGATGCCAAAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAACTTGCTCTTGATTCAAAGAAGGTTGTCAAAGGGGGAAGTGAAAACCCAAGGCATCCGGAGAAGACAAAAGATAAGAGAAAGCATAAAGAACACAGAAAAACAAGAGATTCAAAGACTAGTGGTCAAGATCAGCCCATGCTCTGCACTACAATTTCTGACTGCTATTCAATTGCACCTGATAATGACAAACAAGATTCTGAGGTTGTTGTTTCTTTGAATGGTAATGACTTGAAACAACTGGAAGAGGAATTTAGACGTAAAATCGAGCTAGAAGAAGAGGAAAAGAAGCTTGAAAAAACTTTGGAGTTTCAACGACGGATAGAAAATGAGGCTAAACAGAAGCAACTTGCTGAGCAACAAAAGAAATCCTCTAGGACATATTTAGAGAAAGTGGCAGACAAACTTGAGGATGCTCAGTTGAAGGTTGTTGCTGCTGTGGGTCCAGATGTACAAGAACTAATGAGACCACCTGTGCATGTAATATATCTTGCTCTTGTTTCTCCTTTTACATGAAATTCATCTCTGAACTTTCATTTCTCTCAGGAGCAGTTGACAAAGGAGAATGGATACGTAAGCCATATGGATGGTGCGGTTAATACAACAGCAAATGGATCCACAGGCTCAATCAGTTCTTTGGCTTATCCAGGTTCCCAAAAGATTCATCACATGCATCAGTCAAAAGTTATAGAAGCTGATCTGCCTAATGGAGGAGTTCCAGAGAATGGTCTTCAGTTGCTTGATCGGCGTACTGGTAAAAAGGGTAAACGGCATAAGAATTCTTCCAGGTTGGCTGATGGGAAGTTTGAAGTTGTCCCAATGGAAAAAGAGAATATTGTGGGTGCACCTACTGACAATTGCTTAAGAGAGCAGAAATTCCAGTACCATCAGAATGTTAACAAAGGAGACAATGGATCAAAGACACTGAAAGATTTGCAAGTGGATGATGAGGAGGAAGAAAGGTTTCAAGCTGATCTTAAAATAGCTGTACGCCAAAACACGTATCAAGCCCATAAAAAATTTCCCTTGGTTTCAAGTTTGAGAACACAGCAGAGAGCTTCTTCACAATTAGATAATTTGGGTGTTCCACTGAAGAAAGACACAACTGAGATTGTAAATGGAACTAATTTGCTTGGTACTGGTCTTCAGAATGAAGTTGGTGAATATAATTGCTTTCTCAATGTTATTATACAGTCTTTGTGGCATATAAGACGTTTTCAAGAGGAATTTCTTGGTGGATCAAGATCAGAGCATGATCATGTGGGTAGTCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCCATGGATATTGCATCAAAGGATTCCAGGAGAGAAGCAGTAGCACCTACTTCTCTAAGGATAGCTCTAAGCAACCTATATCCTGATAGTAACTTCTTTCAGGAGGCCCAGATGAATGATGCTTCTGAAGTGCTGGGAGTGATTTTTGACTGCCTTCATCAATCATTTACTCATGGTTCGAGTATTTCTGAAACAGAATCAATGGAAAGCAACTGCATGGGATCTTGGGATTGCTCAAATAGTACTTGTATAGCGCATTCACTCTTTGGAATGAACATTTTTGAGCAAATGAACTGCGATCATTGTGGTCTTGAGTCCAGACATATGAAATATACTTCCTTCTTTCACAACATAAATGCCAATGCCCTTCGGACAATGAAGGTTATGCGTGCTGAAAGCTCCTTTGATGAGCTTTTAAATCTTGTGGAGATGAATCATCAGTTGGCTTGTGATCTGGAAGCTGATGGCTGTGGCAAGCTTAACTACATTCATCACTTTCTTTCAACTCCACCTCACGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGTCGATGATATAACAGCAACTCTGGCAGCGATGACCACCGAGATAGATATCAGTGTTCTTTATCGTGGTTTGGATTCAAAAAGCACTCATACCTTGGTTTCAGTGGTTTGCTACTATGGGCAACATTATTATTGTTTTGCCTATAGCCATGACCATGAACAATGGGTTATGTATGACGATAAGACAGTTAAGGTAATTGGTGGATGGGTTGATGTTCTTACAATGTGTGAAAAAGGGCATCTTCAACCTCAAGTTCTGTTCTTTGAAGCCGTAAACTGA 5004 0.4155 MGHKKRNLAPPSKKSAAAVSLVAQSAIGGAANGTTSAEADLCMNSCTALQNKNSKIELSPPPCEGSAYSTIKLECERALNALRRGNHNKALRLMKESCSRHDSSVYSALIHRVQGTVCVRVASIIDDPSAKQRHLKNAIESARKAVELSPNSIEFAHFYANLIYEAANDANEYEQVMKVCDRALSIENPTDPAKVSLQDESQQKISTAEARIAHVQNELRQLIQKSNIASLSTWMKTTLVNGEEKFRLIPIRRATEDPMEVRLVQTRRPNEIKKVTKTPEDRRKEIEVRVAAARLLQQKSESPQTQNEGDKADRTLDSSLGSGQRIVDRRKYGNMRKNGSTAERLDWVRSYWNSMSIDMKKDLLRIRVCDLKSHFASSKDTLLNDVLSEALSYAEANKTWKFWLCFHCNEKYSDLETHMQHVAQEHMGNLLPKMQRLLPQNVDNEWIEMILNYSWKPLDVSAAVKMLDDQAKCKGSTFLGGSYLAYHTEEYSGCSKDAGESYPEEENLRHSLLNCTSESSKYYQLSENDISEGVHVQGPMAFPLGGVWPTSDDSERAKILEKIHALFEMLIRHKYLATIHLKKVIQFTVDEIQNLATGSQLLSHGVDQTPMCICFLGAPQLRKILKFLQELSHACGLGRYAEKTSSPMEDLQNPSQGSGIKEKIVLNGDASCLLLDECLLSTKLTSTSTQVAVLDDVTAPTSANGYALLSWIFSGSSGDQLTSWTHIEEDKRHQGMEIVQMLEKEFYHLQSLCEKKCERLSCEEALQAVEDLCLEEGKKRENVTVFVRQSYESILRKRREELFEIENDVMYVSNKFELDAISNVLQEAEALNSNQFGYEETCAGVTSKLCDIESGEEDGWRMKDSVNQMDSCIEIAIQKLKEHLSLELNKIDARIMRNVSGVQQLELKLEPVSAHDYRAIMLPLVKSYLRALLEDLAEKDAKEKSDAAREAFLAELALDSKKVVKGGSENPRHPEKTKDKRKHKEHRKTRDSKTSGQDQPMLCTTISDCYSIAPDNDKQDSEVVVSLNGNDLKQLEEEFRRKIELEEEEKKLEKTLEFQRRIENEAKQKQLAEQQKKSSRTYLEKVADKLEDAQLKVVAAVGPDVQELMRPPVHVIYLALVSPFTXNSSLNFHFSQEQLTKENGYVSHMDGAVNTTANGSTGSISSLAYPGSQKIHHMHQSKVIEADLPNGGVPENGLQLLDRRTGKKGKRHKNSSRLADGKFEVVPMEKENIVGAPTDNCLREQKFQYHQNVNKGDNGSKTLKDLQVDDEEEERFQADLKIAVRQNTYQAHKKFPLVSSLRTQQRASSQLDNLGVPLKKDTTEIVNGTNLLGTGLQNEVGEYNCFLNVIIQSLWHIRRFQEEFLGGSRSEHDHVGSPCVVCALYEIFTAMDIASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLGVIFDCLHQSFTHGSSISETESMESNCMGSWDCSNSTCIAHSLFGMNIFEQMNCDHCGLESRHMKYTSFFHNINANALRTMKVMRAESSFDELLNLVEMNHQLACDLEADGCGKLNYIHHFLSTPPHVFMTVLGWQNTCESVDDITATLAAMTTEIDISVLYRGLDSKSTHTLVSVVCYYGQHYYCFAYSHDHEQWVMYDDKTVKVIGGWVDVLTMCEKGHLQPQVLFFEAVN 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1889 1667 CDD Peptidase_C19 1425 1664 - -
Bisa08g1889 1667 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1666 - -
Bisa08g1889 1667 Pfam Protein of unknown function (DUF629) 348 875 IPR006865 -
Bisa08g1889 1667 MobiDBLite consensus disorder prediction 294 320 - -
Bisa08g1889 1667 SUPERFAMILY Cysteine proteinases 1334 1664 IPR038765 -
Bisa08g1889 1667 Coils Coil 198 225 - -
Bisa08g1889 1667 Pfam Protein of unknown function (DUF627) 77 188 IPR006866 -
Bisa08g1889 1667 Coils Coil 1029 1065 - -
Bisa08g1889 1667 MobiDBLite consensus disorder prediction 963 1000 - -
Bisa08g1889 1667 Pfam Ubiquitin carboxyl-terminal hydrolase 1335 1642 IPR001394 GO:0004843|GO:0016579
Bisa08g1889 1667 Gene3D Tetratricopeptide repeat domain 37 302 IPR011990 GO:0005515
Bisa08g1889 1667 Gene3D Cysteine proteinases 1319 1665 - -
Bisa08g1889 1667 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1334 1666 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1889 Bisa-ChrBisa08 45449788 45458821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1889 59 1664 C2H2 Transcription Factor Family AT3G47890 56.158 0.0 1680