Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa08g1886 | ATGGGAATGGATTACTATAACATACTGAAAGTGAATCGGAATGCGAGTGAAGATGATTTGAAGAAGGCGTATAAGAGGCTAGCGATGATTTGGCACCCTGACAAGAACCCAGTTAACAAGGGGGAGGCTGAGGCGAAATTCAAGCAAATTTCCGAAGCTTATGATGTTTTGAGCGATCCCCAGAAGCGTCAGATCTATGATCTCTACGGCGAGGAGGCCCTCAAGACTGGTCAGTTCCCGCCACCTCCAACCTTCTCTGCTGCTTCCATGTCCTCCTCGTCTTCTCGTGCTTACCAGCATTTCCAAAACCAGCAACGCCAGCATACGTCGACGTCGTACCGGTTCAATCCCCGGGACGCCGACGACATTTACGCTGAAATTTTTGGGTCGGAGAATGGTGGAGGTGGAGGTGGGAGAAATGGAGCGCATAGGGATGGGTTTTTTAGGATGTCAAATGGTTCGGCGTTTGGTGGAGCGGAAAGGAAGGCTGGAGCGGTGGAGACTCCTTTGCCTTGTACCTTGGAGGAGCTTTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGACTATCTGTGACGCTTTTGGCAAGTATCGGAATGTGGAGGAGATATTGACTATTGAGGTGAAACCTGGTTGGAAGAAAGGAACAAAGGTTACTTTCCCCGAGAAGGGTAACCAGGAACCTGGTGTCATTCCAGCAGATCTTATATTTGTAGTGGATGAGAAACCACACGCTGTTTATCGGAGGGAAGGTAATGATCTGGTGATGAATCAGGAGATAACTCTTCTGGAGGCCCTTACAGGTAAAACCCTACACATCACTACCTTGGATGGAAGGAATCTAGTGATCCCACTGACAGACATTGTGAAACCTGGTGCTGAGGAGATTGTCCCTAATGAGGGAATGCCCATCTCAAAAGAGCCTGGGAAAAAGGGCAACTTGAGAATTAAGTTTGATGTTAAGTATCCTTCAAGGCTAACCCCAGAGCAGAAATCTGATCTGAGGAGAGTTTTGGGTGGAAATGGAAGCTCAAATGTTTGA | 1044 | 0.4761 | MGMDYYNILKVNRNASEDDLKKAYKRLAMIWHPDKNPVNKGEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKTGQFPPPPTFSAASMSSSSSRAYQHFQNQQRQHTSTSYRFNPRDADDIYAEIFGSENGGGGGGRNGAHRDGFFRMSNGSAFGGAERKAGAVETPLPCTLEELYKGVKKKMKISRTICDAFGKYRNVEEILTIEVKPGWKKGTKVTFPEKGNQEPGVIPADLIFVVDEKPHAVYRREGNDLVMNQEITLLEALTGKTLHITTLDGRNLVIPLTDIVKPGAEEIVPNEGMPISKEPGKKGNLRIKFDVKYPSRLTPEQKSDLRRVLGGNGSSNV | 347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa08g1886 | 347 | Gene3D | - | 245 | 325 | - | - | |
| Bisa08g1886 | 347 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
| Bisa08g1886 | 347 | FunFam | DnaJ subfamily B member 13 | 3 | 138 | - | - | |
| Bisa08g1886 | 347 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Bisa08g1886 | 347 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
| Bisa08g1886 | 347 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Bisa08g1886 | 347 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Bisa08g1886 | 347 | Gene3D | - | 164 | 243 | - | - | |
| Bisa08g1886 | 347 | MobiDBLite | consensus disorder prediction | 77 | 115 | - | - | |
| Bisa08g1886 | 347 | FunFam | Dnaj homolog subfamily b member | 162 | 243 | - | - | |
| Bisa08g1886 | 347 | SUPERFAMILY | Chaperone J-domain | 3 | 85 | IPR036869 | - | |
| Bisa08g1886 | 347 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 167 | 245 | IPR008971 | GO:0006457|GO:0051082 | |
| Bisa08g1886 | 347 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 3 | 339 | - | - | |
| Bisa08g1886 | 347 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 248 | 333 | IPR008971 | GO:0006457|GO:0051082 | |
| Bisa08g1886 | 347 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
| Bisa08g1886 | 347 | MobiDBLite | consensus disorder prediction | 82 | 115 | - | - | |
| Bisa08g1886 | 347 | FunFam | DNAJ heat shock family protein | 244 | 339 | - | - | |
| Bisa08g1886 | 347 | CDD | DnaJ_C | 166 | 327 | - | - | |
| Bisa08g1886 | 347 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
| Bisa08g1886 | 347 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
| Bisa08g1886 | 347 | Pfam | DnaJ C terminal domain | 166 | 324 | IPR002939 | - | |
| Bisa08g1886 | 347 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
| Bisa08g1886 | 347 | Gene3D | DnaJ domain | 2 | 140 | IPR036869 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa08g1886 | Bisa-ChrBisa08 | 45352504 | 45358830 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa08g1886 | 5 | 74 | C2H2 Transcription Factor Family | AT1G74250 | 36.486 | 5.25e-10 | 58.9 |