Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1882 ATGGGTACTGTAAAATGGGTCTTCTTCTTGGTGATTCACGCAGTGGTTTTCTCTCCTTCCTTCCTTGCTCTCACTCAAGACGGTCTTACGTTGTTGGAACTCAAAAGCACTTTGAATGACACTAAGAATCTTCTGAGCAACTGGAATGGTTCTGATGAATCTCACTGCACATGGACTGGTATCAGTTGTCACACCAGTGACCAACGGGTTCGCTCAATAAACCTACCTTACATGCAACTGGGAGGGATTATATCTCCTAGCATTGGGAAACTCAGTAGACTACAGAGACTGGCTCTTCATCAGAACAGCTTACATGGAATCATTCCTAACGAAATCACCAATTGCACTGAGCTAAGAGCACTGTACCTGAGAGCTAATTATTTTCAAGGAGGCATTCCCTCAGAGATTGGAAATCTGTCTCATTTAACTATACTGGATTTATCAAGCAACTCATTGAAGGGGGCTATAACTTCATCTATTGGCCGTCTCACAAATTTGCGAGTTCTGAACTTGTCTACCAATTTTTTCTCTGGTGAAATCCCAGACATTGGAGTACTAAGCACTTTCAGAAACAACTCGTTTATTGGCAATTTAGATCTGTGCGGTCGCCAAGTTCAAAAACCATGTGGAACCTCACTTGGTTTCCCTGTGGTGTTGCCACATGCTGAAAGTGATGAAACTGCAGTTACCAAGAAAAGATCTTCACATTACATGAAGGGAGTGCTGATTGGAGCAATGTCCACAATGGGCCTTTCACTTGTCATAATTCTCTCATTCCTCTGGATTTGTTTGCTGTCAAAGAAGGAAAGAGCTGTGAAGAGATACACACAAGTGAAGAAACAAGTCAATCCCGAAGCAAGTAAAAAGCTTATCACCTTCCATGGTGATCTCCCATACCCATCATCTGAAATCATAGAGAAGCTAGAGTCTCTTGATGAGGAGGATGTGGTAGGATCAGGAGGATTCGGGACAGTATATCGAATGGTCATGAATGATTGTGGAACATTTGCTGTTAAGCGCATTGATCGTAGCCGGGAAGGATCCGATCAGGTTTTTGAGAGGGAACTCGAGATCTTGGGTAGCATCAAGCACATAAATTTAGTAAATTTACGTGGCTACTGCAGGATTCCTTCTTCAAAGCTTCTCATCTATGATTATTTGGCTATGGGTGGCTTAGATCATCTCTTGCATGAAAATACTGAACATAAGTTATTGGACTGGGGTGCTCGCCTTAAAATAGCCCTTGGTTCAGCCCGGGGCTTGGCATACCTGCACCATGACTGCTGCCCAAAAATTGTGCACCGTGACATAAAATCCAGCAACATCCTCCTTGACGAAAACCTGGAACCCCGTGTCTCGGATTTCGGACTTGCAAAGCTCTTGGTTGATGAAGAAGCTCATGTTACCACAGTGGTTGCTGGCACATTTGGCTATCTAGCACCAGAGTATCTACAAAGTGGGAGAGCCTCTGAAAAATCGGATGTTTATAGCTTCGGAGTTCTATTGCTCGAACTTGTGACCGGAAAGAGACCTACGGATCCTTCATTTGTAAAGAGAGGCTTAAATGTTGTTGGCTGGATGAGTACATTATTGAGAGAGAACAGATTAGAAGATGTGGTAGACCGAAGATGCGATGATGCAGATGCAGGAACAGTTGAAGTGATTCTTGAGCTAGCAGGAAGATGCACTGATGCAGACCCGGATGAGCGGCCGTCCATGAACCAGGTGTTACAGGTTTTGGAAGAAGAGGTCATGTCTCCATGCCCAAGTGACTTTTATGAGTCCCATTCAGATCACAGTTAA 1803 0.4393 MGTVKWVFFLVIHAVVFSPSFLALTQDGLTLLELKSTLNDTKNLLSNWNGSDESHCTWTGISCHTSDQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPNEITNCTELRALYLRANYFQGGIPSEIGNLSHLTILDLSSNSLKGAITSSIGRLTNLRVLNLSTNFFSGEIPDIGVLSTFRNNSFIGNLDLCGRQVQKPCGTSLGFPVVLPHAESDETAVTKKRSSHYMKGVLIGAMSTMGLSLVIILSFLWICLLSKKERAVKRYTQVKKQVNPEASKKLITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRIPSSKLLIYDYLAMGGLDHLLHENTEHKLLDWGARLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENLEPRVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRASEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMSTLLRENRLEDVVDRRCDDADAGTVEVILELAGRCTDADPDERPSMNQVLQVLEEEVMSPCPSDFYESHSDHS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1882 600 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 64 581 - -
Bisa08g1882 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1882 600 Gene3D Transferase(Phosphotransferase) domain 1 387 589 - -
Bisa08g1882 600 Pfam Protein kinase domain 313 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1882 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Bisa08g1882 600 SUPERFAMILY Protein kinase-like (PK-like) 293 581 IPR011009 -
Bisa08g1882 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Bisa08g1882 600 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Bisa08g1882 600 SUPERFAMILY L domain-like 25 206 - -
Bisa08g1882 600 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Bisa08g1882 600 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Bisa08g1882 600 Gene3D Phosphorylase Kinase; domain 1 266 386 - -
Bisa08g1882 600 SMART serkin_6 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1882 600 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 387 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1882 Bisa-ChrBisa08 45252265 45270925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1882 8 589 Receptor kinase-like Gene Family AT2G35620 49.141 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bisa08g1882 Pkinase 1.3e-48 CL0016