Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1869 ATGGAGTTTGATTTGGGAAGATCTGGCCATGAAGGTAAGGTCAAGGAAGGGAAGAGAAGTGAATCTAGTGGTGGTGATGATGAAGGTCACCGTAAAGAAGAGATTGATATCGAGGTGCCACCGTTGGTAGATACTACGGGACCAACTACATCTTCAACCAAAAACGAAGTGGATGGGGAGCTTGAATCGGCTAAAGCCGAAATGGGTGAAGTGAGGCAAGAAAACGAGAGGCTAAAGCAATGTTTGGACAAAGTTCTGAAGGATTATCGGTCACTGCAAATGCAATTCCAAGACATAATCCACAAAGACACAAAAGAATCTACTTCCGACAAAGGAAAGGATTACAACAAAAAAGAAACTGTATCCGAGGAATCTGACCTAGTTTCCCTCAGCCTTGGAAGAGTTCCAACAAGTATTAACATTCCAAGAAACAACGAGAAAAGCAAAGTCTTGAAACCATTATTACTGAAGGGTGATGAAGAAGAATGTGATAAAGAAGAGTTGGCTCTTGGATTGGAGTACTGCAAGTTCGAAACATCGAAATCAGGAAGCATTAATAATGAAGGTAGTGTGCCAAATGTAGTTCCAAAAAGTCCAAGCAATAATAGTTGTGAAGTGGCAAAGGAAGGGGAGGCTTGGCCACCAAGTAAAGTGCTCAAAACAGAGAGAGATCATGCTGGAGAAGACGAAGTTTCCCAGCAGAACCCCGCGAAGAAAGCTAGAGTTTGTGTGAGAGCAAGATGTGACACACCTACAATGAATGATGGATGTCAATGGAGGAAGTACGGACAGAAGATTGCTAAAGGAAACCCTTGTCCTAGAGCTTACTACCGTTGTACAGTTGCACCATCATGCCCAGTGAGGAAGCAGGTGCAAAGATGTGCTCAGGACATGTCCATTCTCACGACCACCTATGAAGGAATCCACAACCACCCTATTCCTCTCTCAGCCACTGCCATGGCTTCCACTACTTCTGCAGCCGCCTCCATGCTCTTGTCCGGCTCATCAACCTCTCGGTCTGCCTCATTACCCTCGTCAACCTCCACCGCCACCACCTCTGTTGATCTCCATGGCCTCAATTACTACCTCTCATCAGACGGTTCAAAATTAAAGCAATTCTACCCTTCAAACCCTTCATTGCTATCATCATCATCAACTTCTCACCCAACAATCACTCTTGACCTCACCACAAACCCAGCCTCCAGATTCTCCAACTACACCACACCAAGATCATCATACTCATACCCTTCTTCCACAAGTCTCAGCTTCAGTACTGCCCACACCAACAATGATAATTTTCTCACCTATAATAACAGGAACGTTTTCAGCTCCATGAACGTCCTTAGAAGGCCAACAATGGAGAACATCTACCACCAACTTCCTAGTTCCCTGCAAAAGAGCGGTGTCGTTAATAACCCTAATATTCCTCTTCCTCCTTCTCATGCTCTACCAGATACTATAGCCATGGCAACGAAAGCAATCACGGCAGATCCAAAGTTTCAGTCAGCTTTGGCTGTAGCACTTAGTTCGATTATTGGCGCAGGAAGTGGGATTGGAAGCACCCAAGGGAATAATCATGGTGGCGGAGATAGTTTGGCTCAGAAATTGAAATGGGGAGAGCTGTTTCCAGCGTCATCTTCTCTATGA 1647 0.4511 MEFDLGRSGHEGKVKEGKRSESSGGDDEGHRKEEIDIEVPPLVDTTGPTTSSTKNEVDGELESAKAEMGEVRQENERLKQCLDKVLKDYRSLQMQFQDIIHKDTKESTSDKGKDYNKKETVSEESDLVSLSLGRVPTSINIPRNNEKSKVLKPLLLKGDEEECDKEELALGLEYCKFETSKSGSINNEGSVPNVVPKSPSNNSCEVAKEGEAWPPSKVLKTERDHAGEDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMSILTTTYEGIHNHPIPLSATAMASTTSAAASMLLSGSSTSRSASLPSSTSTATTSVDLHGLNYYLSSDGSKLKQFYPSNPSLLSSSSTSHPTITLDLTTNPASRFSNYTTPRSSYSYPSSTSLSFSTAHTNNDNFLTYNNRNVFSSMNVLRRPTMENIYHQLPSSLQKSGVVNNPNIPLPPSHALPDTIAMATKAITADPKFQSALAVALSSIIGAGSGIGSTQGNNHGGGDSLAQKLKWGELFPASSSL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1869 548 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g1869 548 Pfam WRKY DNA -binding domain 254 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g1869 548 SUPERFAMILY WRKY DNA-binding domain 246 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g1869 548 MobiDBLite consensus disorder prediction 58 75 - -
Bisa08g1869 548 Gene3D WRKY domain 237 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g1869 548 MobiDBLite consensus disorder prediction 1 39 - -
Bisa08g1869 548 FunFam probable WRKY transcription factor 31 238 315 - -
Bisa08g1869 548 MobiDBLite consensus disorder prediction 215 235 - -
Bisa08g1869 548 Coils Coil 54 81 - -
Bisa08g1869 548 MobiDBLite consensus disorder prediction 381 400 - -
Bisa08g1869 548 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 521 IPR044810 GO:0003700
Bisa08g1869 548 MobiDBLite consensus disorder prediction 101 121 - -
Bisa08g1869 548 MobiDBLite consensus disorder prediction 188 236 - -
Bisa08g1869 548 MobiDBLite consensus disorder prediction 1 75 - -
Bisa08g1869 548 MobiDBLite consensus disorder prediction 188 205 - -
Bisa08g1869 548 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1869 Bisa-ChrBisa08 44911916 44915816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1869 29 514 WRKY Transcription Factor Family AT1G18860 39.963 3.81e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa08g1869 WRKY 9.7e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1869 08 44911916 44915816 Bisa02g1403 02 24102941 24107626 ECH
Bisa08g1869 08 44911916 44915816 Bisa08g1869 08 44911916 44915816 ECH