Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1855 ATGGGAAAACGAAGCCTTTTATCAAAGTCTACTAAGAAGATGTCTAGCAGAAGATCAAGATCAAGACAGTCAAGTGGTTCGAGGAACATAACCGACGATCAGATCAACGATCTTGTTTCCAAGTTGCAACAGCTTCTTCCTGAGATTCGCGAAAGGAGTTCTGATAAGGTATCAGCAACGAAGGTGTTGCAAGAGACATGCAACTACATCAGAAGCTTACACAGGGAAGTCGACGATCTAAGCGAACGCTTATCGGAGCTCTTGGCCACCACTGACACTGCTCAAGCTGCCATTATTAGAAACTTACTTATGCAATAG 318 0.4371 MGKRSLLSKSTKKMSSRRSRSRQSSGSRNITDDQINDLVSKLQQLLPEIRERSSDKVSATKVLQETCNYIRSLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1855 105 Gene3D - 31 101 IPR036638 GO:0046983
Bisa08g1855 105 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 19 73 IPR011598 GO:0046983
Bisa08g1855 105 MobiDBLite consensus disorder prediction 1 33 - -
Bisa08g1855 105 FunFam Transcription factor ILI6 20 100 - -
Bisa08g1855 105 Coils Coil 70 90 - -
Bisa08g1855 105 Pfam Helix-loop-helix DNA-binding domain 33 74 IPR011598 GO:0046983
Bisa08g1855 105 CDD bHLH_AtPRE_like 30 90 - -
Bisa08g1855 105 PANTHER TRANSCRIPTION FACTOR PRE 14 104 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bisa08g1855 105 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 91 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1855 Bisa-ChrBisa08 44488331 44490778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1855 30 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 77.922 1.90e-37 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1855 HLH 3.7e-06 No_clan