Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1850 ATGTCTAGCTCTGGCAGAAGAAGATCTATAGCTTCAAAACTCACAGAGAACGAGATCAACGAGCTTGTTTCAAAGTTACAAGCAGCGCTGCCACAAATGAACCAAAGTACCAACTCAAAGGTATCAATATCGAAGATTGTGAAAGAAACTTGCAGTCACATCAAGAAGCTTCAGAAAGAGGTGGAAGAGCTGAGTGAGAGGCTTTCGGGGCTGATGGATTCTGTGGACATCAATGATATTGACGAAGAAACTCTTAGAAATGTCTTACAACAATGA 276 0.413 MSSSGRRRSIASKLTENEINELVSKLQAALPQMNQSTNSKVSISKIVKETCSHIKKLQKEVEELSERLSGLMDSVDINDIDEETLRNVLQQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1850 91 PANTHER DNA BINDING PROTEIN 1 91 IPR044172 -
Bisa08g1850 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 73 IPR036638 GO:0046983
Bisa08g1850 91 Pfam Helix-loop-helix DNA-binding domain 18 58 IPR011598 GO:0046983
Bisa08g1850 91 Coils Coil 47 74 - -
Bisa08g1850 91 Gene3D - 4 89 IPR036638 GO:0046983
Bisa08g1850 91 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 3 57 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1850 Bisa-ChrBisa08 44353456 44353833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1850 7 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.887 1.49e-16 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1850 HLH 6.3e-05 No_clan