Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1843 ATGACGTGTGCAGCCATATTGGTGAAGAATAGTGGGCGCCAGAGTACGAAAGGCGTTAAAGGAACAAAAGCATCACGTGGGGGACTCATTGGTTACGACTCGTCCCACCCAAAAAGCATGAGCCCGCCACGCGCCTTCCTCTCACAGTTTGATATACTTGTGGTATTGTCTCCTGAGCTAGAGGGGTATTTGTGTACTGGAAAATTGCGTAAAGGCATAGCTGGTTTTGTTAAATCTTCTATGGGATCAGAGACTATGGCTCCGACGGCTGAGGAAGTCAATATGTTAGAAGGAACATCGAAAATTAGATCTTGTCCTAGTAAAAAGAACCAAAGGAAAGTCCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATTTGAACGATCTCTTTCTTGATCTTGCCAATGCTCTTGAACTAAGTCAACAAAACAATGGAAAGGCATCCACATTGTGTGAAGCCACTAGGCTGCTAAAGGACCTACTTGGTCAGATTGAGTCCCTTAAGAAGGAGAATGTGTCTTTGCAATCTGAATCTCATTATGTGAACATGGAGACAAATGAGTTGAAGGAGGAAAATTCGGTTCTAGAGACTGAAATAGAGAAACTAAAAGGCGAGATAGAAGCACGAATAGCACAAGCTAAACCTGACCTAAATGTACCTCCCCCTTCAGAACTAGAGCCATCAGAACAATCAACAATTTTTTCCAGAGACAGTCTCCAATTGCCTACTGTTGATCCTACATTGCAGCAAGGACCTGCAGTCTTAGTGGTCCCCTTTAATCCGCATCTTCAAGCTTCCTTTTCTGCTCCTAACATTCCCGAGCTCGCCTCCAAACCTACCTCCGTTGTGAGTAAACCACATGCCAGGTATCCCACCCCTGCAGATTCGTGGCCATTGCAGTTGCTCGGAGAGCAACCAACTTCAAATTAA 945 0.4476 MTCAAILVKNSGRQSTKGVKGTKASRGGLIGYDSSHPKSMSPPRAFLSQFDILVVLSPELEGYLCTGKLRKGIAGFVKSSMGSETMAPTAEEVNMLEGTSKIRSCPSKKNQRKVPKRIHKAEREKMKREHLNDLFLDLANALELSQQNNGKASTLCEATRLLKDLLGQIESLKKENVSLQSESHYVNMETNELKEENSVLETEIEKLKGEIEARIAQAKPDLNVPPPSELEPSEQSTIFSRDSLQLPTVDPTLQQGPAVLVVPFNPHLQASFSAPNIPELASKPTSVVSKPHARYPTPADSWPLQLLGEQPTSN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1843 314 Gene3D - 111 189 IPR036638 GO:0046983
Bisa08g1843 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 113 185 IPR036638 GO:0046983
Bisa08g1843 314 Coils Coil 162 182 - -
Bisa08g1843 314 PANTHER TRANSCRIPTION FACTOR BHLH47 81 313 - -
Bisa08g1843 314 Coils Coil 190 217 - -
Bisa08g1843 314 MobiDBLite consensus disorder prediction 277 314 - -
Bisa08g1843 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 165 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1843 113 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 53.488 4.85e-59 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1843 08 44150236 44152869 Bisa08g1843 08 44150236 44152869 ECH