Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1841 ATGGAGGGAGGTGATGATCTCCACCACCATCACCACCATCACCACCACCGTCCAACCTTCCCCTTCCAACTTCTCGAGAAGAAAGATGATCAAGAAGCTGCTTCTTGCTCAACTTCATCCCCTTACCCTTCTTTGGCCATATCTGCTGAACCCATTCCATCCAATTCAAACCGATCTAATCAACTCGTCACGTCCACGGAACAACCCTCCAATAAGAAGCCCCCGCCTAAGAGGACCTCCACCAAGGACCGCCACACCAAGGTCGATGGGCGGGGACGGCGCATTCGGATGCCTGCCCTTTGTGCCGCCCGGGTCTTCCAGCTCACCCGCGAGCTAGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTGCTCCAGCAGGCCGAGCCTGCCGTCATCGCCGCCACCGGCACTGGCACCATCCCAGCTAACTTCACGTCACTTAACATATCCCTGAGGAGTTCCGGCTCCACCATGTCCGTCCCGTCTCAGCTAAGATCGTCCTATTTCAATCCCAACTTCTCCGTCCAACAGCGCCGGAGCTTATTCCCCGGAATTGGGTTATCCTCCGACAACACCACGGCGTCCACTCTTTTGAATTTTCAATCCAATAACCTAGCCACAACCCTATTGCAAGCGAAGCAGGAGCTGCGCGATGGCGGCGGTGGGCCACTGGATTTGTCGGAGACCACCGAAGAAGGTATGGCAAGAAAACGGCGGCCGCCAGAGCAGGACTTGTCATCGACGCAGCATCAAATGGGGAGTTATTTGTTGCAGTCGAGCACGGGGGCGATCCCGGCAAGCCATGCTCAGATTCCGGCGAACATCTGGATGGTGACGAATTCAAATAACCAGGTCATGAGCGGCGATCCTATATGGACATTCCCACCGGTGAATAACAGTGGGCTGTATAGAGGCTCCATGTCAAGTGCTTTGCATTTCATGAACTTCCCTACACCTATGGCCCTATTGCCAAGTCAGCAATTAGGGTCATCGGGGATTAGTGGCGGCGGCAGTAGCGGGAGTGGTGGTAATATTAACGAAGGACATTTGAGTATGCTGGCCGGGCTGAACCCATACCGGCCGGTGATCGGGCTGTCGGAGTCTCAGGCGAGCGGGTCCCAGTCTCACCCCGGCGGTGGGGGCGGCGACGATCGACACGACACCGCCAGCCACCACTCATAG 1185 0.5671 MEGGDDLHHHHHHHHHRPTFPFQLLEKKDDQEAASCSTSSPYPSLAISAEPIPSNSNRSNQLVTSTEQPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSLFPGIGLSSDNTTASTLLNFQSNNLATTLLQAKQELRDGGGGPLDLSETTEEGMARKRRPPEQDLSSTQHQMGSYLLQSSTGAIPASHAQIPANIWMVTNSNNQVMSGDPIWTFPPVNNSGLYRGSMSSALHFMNFPTPMALLPSQQLGSSGISGGGSSGSGGNINEGHLSMLAGLNPYRPVIGLSESQASGSQSHPGGGGGDDRHDTASHHS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1841 394 MobiDBLite consensus disorder prediction 217 251 - -
Bisa08g1841 394 Pfam TCP family transcription factor 79 245 IPR017887 -
Bisa08g1841 394 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 384 IPR005333 GO:0003700
Bisa08g1841 394 ProSiteProfiles TCP domain profile. 81 135 IPR017887 -
Bisa08g1841 394 MobiDBLite consensus disorder prediction 367 394 - -
Bisa08g1841 394 MobiDBLite consensus disorder prediction 231 245 - -
Bisa08g1841 394 MobiDBLite consensus disorder prediction 34 75 - -
Bisa08g1841 394 MobiDBLite consensus disorder prediction 26 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1841 Bisa-ChrBisa08 44084295 44085479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1841 18 388 TCP Transcription Factor Family AT3G47620 42.050 1.78e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa08g1841 TCP 1.3e-38 No_clan