Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1826 ATGAAGAAGGTGAGTAGGGTTGGGAACGCATCGTCGTCTTGCTCAGTGATGAGAAATATTCGATATGGAGAGTGTCAGAAGAACCATGCTGCTTCCGTTGGAGGGTATGCCGTGGATGGTTGCAGAGAGTTCATGGCCAACGGAAGGGAAGGTACCTCTGGGGCTCTCACGTGTGCTGCTTGCGGTTGTCATCGGAACTTTCATCGGAGACAAGACCAGTCCGAGGTTGTCTGTGAGTACTCTCCTCCTCCGAGTCGTAACTCTGCTCACTGA 273 0.5238 MKKVSRVGNASSSCSVMRNIRYGECQKNHAASVGGYAVDGCREFMANGREGTSGALTCAACGCHRNFHRRQDQSEVVCEYSPPPSRNSAH 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1826 90 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 21 71 IPR006456 -
Bisa08g1826 90 Pfam ZF-HD protein dimerisation region 20 72 IPR006456 -
Bisa08g1826 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 75 - -
Bisa08g1826 90 MobiDBLite consensus disorder prediction 71 90 - -
Bisa08g1826 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1826 Bisa-ChrBisa08 43541327 43541599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1826 17 85 Zinc finger-homeobox gene family AT3G28917 74.286 9.25e-35 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa08g1826 ZF-HD_dimer 7.7e-30 No_clan