Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1806 ATGGAAAACGCTTCTGAACTGGGTAAGAAAGAGGATCAGATGGATTTGCCTCCTGGGTTTCGGTTTCATCCCACAGATGAAGAACTCATCAGTCACTATCTTTACAAGAAAGTCACCGATGCCAACTTCTCTGCTAGAGCCGTTGGAGAGGTCGACCTCAACAGGTCTGAGCCATGGGAATTACCATGGAAAGCGAAAATGGGAGAGAAAGAGTGGTACTTTTTCTGCGTGAGAGACAGAAAATACCCTACTGGTTTGAGAACCAACAGGGCCACTGAAGCAGGGTACTGGAAGGCCACAGGGAAAGACAGAGAGATTTACAGAGGGAAATCGCTTGTTGGGATGAAGAAGACTCTGGTTTTCTACAAAGGAAGAGCCCCAAAAGGCCAAAAAACCTACTGGGTCATGCATGAATACAGATTAGATGGTAAATTCTCTGTCCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTGATCTGCAGGGTGTTTGAGAGGAACAATGGTGGAAAGAAAGCCCATATTTCTGGTATAATGAGGTTGGAATCCATAGGAAACGAATTGGGTTCCTCTGGTTTACCTCCACTCACAGATTCTTCTACTTACATTGGCAAAACCAAACTTATGAATATGACGAGTGAATCTTCTTACGTGCCCTGCTTCTCCAATCCAATCGATGTTCCAGGAAACCAAGGAGGGATCTTTGATTCCTTCGAGAACACCCTTTTGGGCGTTCCTTCGAATCCTCAGGAAATCCTTCCTAGAATCCCTCTTTCCGGTTCGATCTATTCCTCTCAACAACCCCTTCAAGTACGCAGCTCTGTTTATCCTGTTCAGGACCAGTCTCTCCTTTCTGCTTTACTTGAACACCGTAGATCGAACTTGAGAAGTGGGTTCAATTTCAGACCAGAGAGGGACAAAATGGTCAGTGTCTCGCAAGAGACAGGCCTCACTTCTGATATGAACCCCGAGATCTCTTCTGTGGTATCAAATTTTGATATGGGAAGAAGGGCTTTCGAGAATCAGCAAAACCCACCTGCTGCTGCTGCTCCAGTAAACCTTGATATTTCATGGGCTATTATTATTTTTCTTCTGGATTCTGTTGTGTCAGTACAATCCAGTTATTGTTGGGACTTGGGACTTGGGAATTGGGACTTGGGACTTGAGTGCTGTGCTTTGATTGATTCTCGTAGCAATTATTGCATATTTGATTTCAAACTGTGGGGACTCTGA 1233 0.4493 MENASELGKKEDQMDLPPGFRFHPTDEELISHYLYKKVTDANFSARAVGEVDLNRSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYKGRAPKGQKTYWVMHEYRLDGKFSVHNLPKTAKNEWVICRVFERNNGGKKAHISGIMRLESIGNELGSSGLPPLTDSSTYIGKTKLMNMTSESSYVPCFSNPIDVPGNQGGIFDSFENTLLGVPSNPQEILPRIPLSGSIYSSQQPLQVRSSVYPVQDQSLLSALLEHRRSNLRSGFNFRPERDKMVSVSQETGLTSDMNPEISSVVSNFDMGRRAFENQQNPPAAAAPVNLDISWAIIIFLLDSVVSVQSSYCWDLGLGNWDLGLECCALIDSRSNYCIFDFKLWGL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1806 410 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Bisa08g1806 410 FunFam NAC domain-containing protein 100-like 25 170 - -
Bisa08g1806 410 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Bisa08g1806 410 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 264 - -
Bisa08g1806 410 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Bisa08g1806 410 SUPERFAMILY NAC domain 12 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1806 Bisa-ChrBisa08 43078250 43079884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1806 14 358 NAC Transcription Factor Family AT5G07680 59.078 2.03e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa08g1806 NAM 4.6e-38 No_clan