Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1800 ATGAATATTAGGTTCTGTTCCTACCTTCAACCTTACTCCAAGATCATGGGCACAAATGTTCATTCTAGGGACATCACATACATACAGGGAGGCGAGTTTGTTTGTCACAGCTTCTTCAGCCCACGTCGCGCTGCTGTTGGACGCGACGTTGACTCGCCCCTAGCCGGAGCCATCACAGGAGCTATTGCTGGTGCCTTAGCAAGTAGGGCTTCTGAGAGCGGTTTTCTCCGCGGAGCTTCATTGGGTGCCATTGCTGGAGCTATAATATCTGTTGAGGAGCTCGTCGACCATGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTTGAGGAACAATTTACACCAGCTATATTAACTGCTTACAGTTGGCAGGTTGGTATAGGCTATGACGAGATTCATGAAGGTCATAGCTTAGTATCGTCCAGAGGATTGTCTGGGGATTCATTGAAGAAGTTACCGCACCACGTGATCTTAAAGGACATGAAGACAGAGAATCTCTGCTGCACAATATGTTTGCAGGATATTGAAGTCGGAGAAATTGTGAGGAGCTTACCACGATGTCACCACACTTTTCACTTGAAAAGCACTTTAGGATCCAAGGGAGCTAGAGAGCAAGCAGAGCTGGGAATGAAGCCAATTGGTTTGAAGAATCATCTCAGAGAGAAATCATATAATGAATTTATCCTTGTATGGTTACAAAGCATAATTGCTTTACGTTTTGAGACATTACGAGTTACAAGCTGA 744 0.4503 MNIRFCSYLQPYSKIMGTNVHSRDITYIQGGEFVCHSFFSPRRAAVGRDVDSPLAGAITGAIAGALASRASESGFLRGASLGAIAGAIISVEELVDHDFIEQLVRGRLVEEQFTPAILTAYSWQVGIGYDEIHEGHSLVSSRGLSGDSLKKLPHHVILKDMKTENLCCTICLQDIEVGEIVRSLPRCHHTFHLKSTLGSKGAREQAELGMKPIGLKNHLREKSYNEFILVWLQSIIALRFETLRVTS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1800 247 Coils Coil 238 247 - -
Bisa08g1800 247 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 54 194 IPR044523 -
Bisa08g1800 247 SUPERFAMILY RING/U-box 149 193 - -
Bisa08g1800 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 199 IPR013083 -
Bisa08g1800 247 Pfam RING-like zinc finger 168 194 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1800 Bisa-ChrBisa08 42940272 42945141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1800 54 193 C3H Transcription Factor Family AT1G74410 46.914 9.71e-36 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1800 08 42940272 42945141 Bisa08g1800 08 42940272 42945141 ECH