Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1796 ATGGAGGTTGAGGGCCTTGATTTGAACAAAGTCTCTGCTGGTGCTGAAAGTAATAGAAAGTGTGGTGATGGGTTCAGTGATAGAAGCGAGGTGAAGATATTGTTGTGTGACAACAATACCAAGAGTTCGGAAGAGGTCTTAACGCTTCTTTTGGGATGCTCTTATCAGGTTACTTCAGTAAGGTCAGCGAGGCAGGTAATTAATGCACTGAACACAGAGGGCCAAGATATAGATATCATACTAGCTGAAGTTGACCTTCCTATGAAGAAGGGCATGAAGATGTTGAAGTACATCACACAGGACAAAGTTCTGCATCGAATTCCTGTTATAATGATGTCCGCGCAAGATGAGGTATCCATTGTCATTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGGACTAATGAACTTTTAAATTTGTGGACGCACATATGGAGAAGGAGTCGCATGCTTGGTCTCACAGAGAAGAACATATTGAACTATGACCTTGATCTGGTAGCATCAGATCCTAGCGATGCTAATACAACCAGTACCACCTTGTTCTCAGATGATACAGAAGACAAGACCATGAGAAGCCCCAATCCAGAGACAGGAATATCAATCCAACAGGAATATGAGTCAACTACTGTTGCTGATGCTGTTGTTGCTGCTGATATTGATATGCTTAAGGAACCTCCAGATGCTCATCCATCCAAACATCGGCCAGATGTCTCTGGAATTAATGATTGCCAAATAACACACTTTTCGTCTGGACCAAAGAAGATAGAACTAAGGATTAGGGAGTCATCGGCCTTCTTCCGTTATGTTGAAACAACCACACAGAAGGGCAACTCTCAGGGGATTGCTCAAGTGGATGACACCACTGCCGCACATTTGACGATGAAAGACATGCATCAAGCGTGTTCTCATTGGGGGATTTGTGACCTTCAAGCACATGAAAACGGAGAGCCATGCTCATCTGCAAGACCTTGCCAAGATGACATACCCGGCAGCAATAGCATTCCTGATTCTTTTTCAATTAAGGTGTCTTCAACTTCACCTGCATCAATGGGAATTTTTAAGCAGAAGTATTTCAATGAGCAACATTTACCTCAGGGTATGATCCATTTAAGAAATGGATCTGAGACTAAAGTATCCAGTATACCTGCCCAACATGCTTATCCATATTATATTTCAGGGGTCGTTAATCACATTCCTATGCCATCGTTAGCACAATTGTATCAGAAGAATCTCCAGGACCGACAGAATCATGCTAGCACAACTATGATTACACAGTACAACAATATTTCCCAATGCCCTTCCTACCCATATTACCCTGTTAGTATATGCTTGCAACCTGGTCAGATGTCTACATCTCATTCATGGCCATCCGTTGGAAGTTCAAGTTCACCCAAAGTACAGTTAAATAAAGTCGACAGAAGAGCAGCAGCATTGATGAAGTTCAGACAGAAAAGGAAAGAGAGATGCTTTGATAAGAAAATTAGGTACGTCAACCGGAAGAGACTTGCTGAAAGCCGGCCTCGTGTGAGGGGGCAGTTTGTCCAAAAGTTGAATGGTGTTAATGTGGATCTTAATGGACAACCTTCTTCCATTGACTATGATGATGACGACGAAGAGGATGAAGAGACGTGTGGGAAGATATCCATCTCCTGA 1668 0.4275 MEVEGLDLNKVSAGAESNRKCGDGFSDRSEVKILLCDNNTKSSEEVLTLLLGCSYQVTSVRSARQVINALNTEGQDIDIILAEVDLPMKKGMKMLKYITQDKVLHRIPVIMMSAQDEVSIVIKCLRLGAADYLVKPLRTNELLNLWTHIWRRSRMLGLTEKNILNYDLDLVASDPSDANTTSTTLFSDDTEDKTMRSPNPETGISIQQEYESTTVADAVVAADIDMLKEPPDAHPSKHRPDVSGINDCQITHFSSGPKKIELRIRESSAFFRYVETTTQKGNSQGIAQVDDTTAAHLTMKDMHQACSHWGICDLQAHENGEPCSSARPCQDDIPGSNSIPDSFSIKVSSTSPASMGIFKQKYFNEQHLPQGMIHLRNGSETKVSSIPAQHAYPYYISGVVNHIPMPSLAQLYQKNLQDRQNHASTTMITQYNNISQCPSYPYYPVSICLQPGQMSTSHSWPSVGSSSSPKVQLNKVDRRAAALMKFRQKRKERCFDKKIRYVNRKRLAESRPRVRGQFVQKLNGVNVDLNGQPSSIDYDDDDEEDEETCGKISIS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1796 555 MobiDBLite consensus disorder prediction 530 555 - -
Bisa08g1796 555 Pfam CCT motif 479 520 IPR010402 GO:0005515
Bisa08g1796 555 Gene3D - 31 232 - -
Bisa08g1796 555 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Bisa08g1796 555 MobiDBLite consensus disorder prediction 177 202 - -
Bisa08g1796 555 ProSiteProfiles CCT domain profile. 479 521 IPR010402 GO:0005515
Bisa08g1796 555 SMART REC_2 31 146 IPR001789 GO:0000160
Bisa08g1796 555 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 218 IPR045279 GO:0009736
Bisa08g1796 555 SUPERFAMILY CheY-like 29 156 IPR011006 -
Bisa08g1796 555 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1796 Bisa-ChrBisa08 42903698 42908466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1796 20 540 Response Regulator Gene Family AT5G61380 47.659 1.80e-162 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bisa08g1796 Response_reg 1.1e-16 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1796 08 42903698 42908466 Bisa08g1796 08 42903698 42908466 ECH