Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1790 ATGCGAGGAGGGTTTAGTGCCCTCGTGCTAAAGCCTCAATCTTTATCTTCCTCTTCTCTTCCCCTGCTTACTCTCTTCTTCTTCCTCTTCGCCTTCCCCGTCTCTGCTTTAAACTCCAACTTCAACTTCTCACCCCCTGTCATTTACCTCATCGATTGCGGCTCCTCCAACCAGACCCTTCTCCAAGATGGCAGGACCTTCAAATCCGACCGTGACTCCTCTTCTCTTCTCTCCACAGACGAGGATGTGGAAACCTCAGTCAACTCCATCAACCTCAATGCATCCTCCTCTGTCCCTCCCACCTCACTGCCTTTATTCAACAGTGCGAGAATCTTCTTACAAGAATCCACCTACACTTTTTATATCTCCAAAATGGGTCGTTTCTGGGTTCGTCTGTACTTCTTCCCTCTCCCACATCCTTCGTACAATCTCACCACTGCGGTTTTCACTGTCCAAACTGACCATTTTGTCCTCTTGCATGACTTCTCTGTCAAAGACAACACCTCGTTTGTCTACAAAGAGTACCTCCTTAACGTCTCCGACTCTAGATTCTCCATCAAGTTCAAACCCCACAAGAACTCTATCGCTTTCATTAATGGCATCGAGGTTGTCTCTGCCCCTGACCCTCTTATTCCCAACACAGCAACCTCGCTTTCCCCAAATGGAGATTTCAATTTCAATGGGATCTCCAACTACGCTCTTCAAGTGTCTTACAGAGTCAACGTTGGAGGATCCACCATAGGTCCAAAGGAAGATCCTTTGTTAAGAACATGGGAGATTGATAATTCCTATAATGTTTTCCCACAAGGGTCCAAAAATGTCAGTGTCTCAACCAAACTCATCAAATACCCACAAACAGGTGAAACCACCGCTTTGATTGCTCCTACCAGTGTTTATTCCACGGCAATCCAAATGAAGGATCCGAAAGTGAACCAACCCAATCTTAATCTCACATGGAGGATGAACATAGAAAAGGATTACTCCTATTTGATAAGATTACACTTCTGTGACATCATAAGCCAAAGCCTTAACCAATTGTACTTCAATGTCTACATAAACGAAATGATGGGTGCCTCAAGTTTAGACCTTTCTTCTCTGACCAAAGCTCTAGACACTGCTTATCACAAAGACTTTGTACTCAACCCTTCTGAGATAAAGAACAGTTCTATTTCAGTTCAAGTGAGCCCTGCAGATTCCCAACAAGGTTTACCCAATGCGATTCTTAATGGACTCGAAGTGATGAAGATGAGCAATAAAGCTAACAGCTTGGATGGGCTTTTCAATGTTGATGGGAAATACATGGGACCAGGCTGTGTTTCCAAGAGTATGAAAATCGTTGCTGCTGTTGGGGTAGGATTCTCTGTGATTGCCATGTTTTTTGTTGCTGTGGTCTGTTTCAGATGGCGAAGGAGGCCTACTGGGTGGGAAAAGCGAAACAGCTTCTCTTCATGGCTTCTTCCTATTCAATCCACAGGTCGCGGAAGCTTGTTTTCTGCTTCAAGCAACAGCAGCTCTAGAAGATCGAGATCGAGCATCTTCGGTTCTCGCAAGAGCAAAAACGGTTACTCTTCTGGTTATTTAACATTCAAAGGGATCGGGAGATTCTTCCCCTTTTACGAACTCCAACAAGCCACGAACAACTTCGATGAGAAAACAATAATCGGTGTCGGAGGATTCGGAAACGTCTACCTAGGAACACTCGAAGACGGTACTAAGGTTGCTATAAAGCAAGGAAACTCAAGTTCAGAACAGGGAATAAACGAGTTCAGAACAGAGATAGAAACGCTGTCCAAACTTCGGCATCGTCACTTAGTTTCTTTAATAGGGTTTTGCGACGAAAACTCAGAGATGATTCTGGTTTACGAATACATGGCAAACGGCCCATTTCGCTCTCATCTTTACGGCTCCAACCTCCCTCCATTGTCGTGGAAACAGAGGCTCGAAATCTGCATAGGCTCTGCTCGTGGGCTTCACTATCTCCACACTGGTGCAGCTCAGAGCATCATCCACAGAGACGTGAAAACCACCAACATACTCTTAGATGAAAACCTAGTAGCCAAAGTTTCAGACTTTGGACTCTCCAAAGCGAACCCAGAGAAAACCCACGTGAGTACAGCGGTAAAAGGCAGTTTCGGATACTTAGATCCTGAATATTTCAGAAGTCAACAGCTGACTGAGAAGTCGGATGTTTATTCGTTTGGGGTTGTTTTAATGGAAGTACTATGCGCGAGGGCAGTGATAGCTCCGACACTGCCAAGAGAACAAGTGAACTTAGCAGATTGGGCGTTGCAGCAACACAGGAAAGGGATGCTTCATAAAATCATCGATCCTCGTATTGCGGAGACTATTGCTTCTGGGTCGTTGACCAAGTTTGTGGAAGCTGCAGAGAAGTGTTTGGAGGATCACGGGGCTGACAGGCCTGCCATGGGGGATGTGTTGTGGAATCTGGAGTATGCTTTGCAGTTGCAGGAGGCTGCTTTGAAGATCGACGTCGCTGAGGATAAGACTCTGAACTTGATTGGGTTGGAGCAGCGGAGTGAGAGTGAGAAGAATGCAGGGGATCATTCGGGGACTCAGCCCAGTGAGGAGTCTGATATGAACGACGTTGATTCTTTGTTCTCTCAGATGCCTCCTTTTCGAGGGAGGTAG 2649 0.4583 MRGGFSALVLKPQSLSSSSLPLLTLFFFLFAFPVSALNSNFNFSPPVIYLIDCGSSNQTLLQDGRTFKSDRDSSSLLSTDEDVETSVNSINLNASSSVPPTSLPLFNSARIFLQESTYTFYISKMGRFWVRLYFFPLPHPSYNLTTAVFTVQTDHFVLLHDFSVKDNTSFVYKEYLLNVSDSRFSIKFKPHKNSIAFINGIEVVSAPDPLIPNTATSLSPNGDFNFNGISNYALQVSYRVNVGGSTIGPKEDPLLRTWEIDNSYNVFPQGSKNVSVSTKLIKYPQTGETTALIAPTSVYSTAIQMKDPKVNQPNLNLTWRMNIEKDYSYLIRLHFCDIISQSLNQLYFNVYINEMMGASSLDLSSLTKALDTAYHKDFVLNPSEIKNSSISVQVSPADSQQGLPNAILNGLEVMKMSNKANSLDGLFNVDGKYMGPGCVSKSMKIVAAVGVGFSVIAMFFVAVVCFRWRRRPTGWEKRNSFSSWLLPIQSTGRGSLFSASSNSSSRRSRSSIFGSRKSKNGYSSGYLTFKGIGRFFPFYELQQATNNFDEKTIIGVGGFGNVYLGTLEDGTKVAIKQGNSSSEQGINEFRTEIETLSKLRHRHLVSLIGFCDENSEMILVYEYMANGPFRSHLYGSNLPPLSWKQRLEICIGSARGLHYLHTGAAQSIIHRDVKTTNILLDENLVAKVSDFGLSKANPEKTHVSTAVKGSFGYLDPEYFRSQQLTEKSDVYSFGVVLMEVLCARAVIAPTLPREQVNLADWALQQHRKGMLHKIIDPRIAETIASGSLTKFVEAAEKCLEDHGADRPAMGDVLWNLEYALQLQEAALKIDVAEDKTLNLIGLEQRSESEKNAGDHSGTQPSEESDMNDVDSLFSQMPPFRGR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1790 882 FunFam Receptor-like protein kinase FERONIA 624 837 - -
Bisa08g1790 882 PANTHER OS07G0166700 PROTEIN 534 823 IPR045272 GO:0004714|GO:0006468
Bisa08g1790 882 SMART serkin_6 548 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1790 882 FunFam Putative receptor-like protein kinase 48 207 - -
Bisa08g1790 882 Gene3D Phosphorylase Kinase; domain 1 512 623 - -
Bisa08g1790 882 Gene3D Transferase(Phosphotransferase) domain 1 624 838 - -
Bisa08g1790 882 Pfam Malectin-like domain 51 416 IPR024788 -
Bisa08g1790 882 MobiDBLite consensus disorder prediction 843 882 - -
Bisa08g1790 882 MobiDBLite consensus disorder prediction 853 871 - -
Bisa08g1790 882 FunFam Receptor-like protein kinase FERONIA 233 418 - -
Bisa08g1790 882 FunFam receptor-like protein kinase FERONIA 511 623 - -
Bisa08g1790 882 ProSiteProfiles Protein kinase domain profile. 548 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1790 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Bisa08g1790 882 SUPERFAMILY Protein kinase-like (PK-like) 533 814 IPR011009 -
Bisa08g1790 882 CDD STKc_IRAK 554 817 - -
Bisa08g1790 882 ProSitePatterns Protein kinases ATP-binding region signature. 554 576 IPR017441 GO:0005524
Bisa08g1790 882 Pfam Protein tyrosine and serine/threonine kinase 552 755 IPR001245 GO:0004672|GO:0006468
Bisa08g1790 882 Gene3D - 45 207 - -
Bisa08g1790 882 Gene3D - 232 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1790 Bisa-ChrBisa08 42795789 42798437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1790 37 856 Receptor kinase-like Gene Family AT5G61350 61.687 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa08g1790 Malectin_like 5.1e-37 CL0202