Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1784 ATGGGTTGTGTGAGTTCGAAGCAGGCGGTGTCAGTCACGCCTGCTATTGACCACTCTGGTGTGTTTCGGGGCAATGCCGGTACGGGTAATTCGGGAAGGAATTTGGGAGAGTCGGATAAGAAGAAGAAGAGTGAGTCAGTGGGACTGAGTAGAAGCGAGGTGGGTGAGTCAGGGAGGGCGAGTTCAAATGGGGGTTGTGAGTCCTTGAGCTTCAGATTGGGGAATCTGCACAAGTACGTAGAGGGAGAGCAGGTGGCCGCGGGTTGGCCGGCTTGGCTTAGCGCCGTCGCCGGTGAAGCCATTCAGGGTTGGGTGCCACTCCGAGCTGATGCATTTGAGAAACTAGAGAAGATTGGACAAGGTACATACAGCAGTGTGTTCAGAGCACGGGACCTTGAGACGGGGAAGATAGTGGCTCTGAAGAAGGTGCGGTTTGACAACTTTGAACCAGAAAGTGTCAGGTTTATGGCTCGAGAGATCATGATTCTCAGAAGGCTTGATCATCCAAACATCATAAAATTGGAGGGCTTGATTACATCCAGATTGTCATGTAGCATATATCTTGTCTTCGAGTATATGGAACATGACATCACAGGGCTCTCATCTTCCCCTGATATCAAGTTTAGTGAATCACAGATCAAATGTTACATGAAGCAATTGCTATCTGGGCTTGACCATTGTCATTCCCGAGGTGTAATGCATCGTGACATCAAAGGGTCTAATCTTCTGGTGAATAATGAAGGGATACTAAAGGTGGCTGATTTTGGATTGGCAAACTTCTGTAATTCTGGGCACAAGCAGCCCCTCACAAGTCGTGTTGTCACCCTTTGGTACCGTCCTCCTGAACTTTTGCTGGGTTCAACGGACTATGGTCCATCTGTGGATCTCTGGAGCATTGGCTGTGTATTTGCAGAACTACTTGTGGGGAAGCCTATCCTTCAAGGGAGAACGGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCGCCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACTTTGTTTAAGCCACAGCAACCATATAATAGTTGTCTCCGAGAGACCTTTAATGATTTGCCTGCCACCAGTGTGAATTTGCTACAAGCTCTTCTTTCCATTGAACCATACAAACGTGGAACTGCCTCATCTGCTCTCTCATCAGAGTATTTCAAAACAAAGCCATATGCATGTGAGCCATCAAGCTTGCCAAAATATCCGCCTAGCAAGGAGATTGATGCAAAATTCCGGGAGGAGTCAAGGAGGAAAAAGATTGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAACCATCAAGGAAGCCTCTGGGATTCAAGAAATTAGTCCCGACAGAGGATTTGGCAAGTCAAACCCAGAATTCCGAAGGGGTCAATGGCAGATCAGTGCACATCCTTAAAGAGAATACCAACATAAGTGAGGAGGAACCAAAGCCATCTAGTGGTAAACCAGAAGATGCCTCCCATACAAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGACCCTTGCAAGTTTCCACATCTAGTGGCTTTGCCTGGGCAAAAAGGCGTAAAGATGATGCTTCAATAAGATCCCACTGTCGATCTATTTCAAGAGGGCATATTATCAATCCATTAGAATTGTCTATACCAAATTCAAGGAATAATTTTGATTCCAAAAACTTGGAAAATATAGACTCCGGGGGACATCCCAACTCTAGGAGTCATGACTCACATGAAATTCCTCAGCTTCCAAATCAATGGAGCAAGTTTGATCGCCCAGATTCATTTGATGCTTCTGACGAATACCACTCGCAAGAACTGTCTATGGCACTTTATCATAGAGAAGATTCAGCATCCAAGAGAAGTAACATTAGTTATCAGGATCAAGGAGAGAAGGTTGAATTTTCAGGACCCCTACTGTCTCAAATGCATACAGTTGATGAGCTCTTAGAAAGACATGAGCGCCACATCCGCCGCACAGTCCGAAAATCTTGGTTTCAAAGAGGTAAGAAGTATGGGAAGTGA 2040 0.4569 MGCVSSKQAVSVTPAIDHSGVFRGNAGTGNSGRNLGESDKKKKSESVGLSRSEVGESGRASSNGGCESLSFRLGNLHKYVEGEQVAAGWPAWLSAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARDLETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLSSSPDIKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFCNSGHKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYNSCLRETFNDLPATSVNLLQALLSIEPYKRGTASSALSSEYFKTKPYACEPSSLPKYPPSKEIDAKFREESRRKKIGGRARGPETRKPSRKPLGFKKLVPTEDLASQTQNSEGVNGRSVHILKENTNISEEEPKPSSGKPEDASHTKNASQGDIPFSGPLQVSTSSGFAWAKRRKDDASIRSHCRSISRGHIINPLELSIPNSRNNFDSKNLENIDSGGHPNSRSHDSHEIPQLPNQWSKFDRPDSFDASDEYHSQELSMALYHREDSASKRSNISYQDQGEKVEFSGPLLSQMHTVDELLERHERHIRRTVRKSWFQRGKKYGK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1784 679 CDD STKc_CDK9_like 112 396 - -
Bisa08g1784 679 Gene3D Phosphorylase Kinase; domain 1 99 194 - -
Bisa08g1784 679 FunFam probable serine/threonine-protein kinase At1g54610 195 435 - -
Bisa08g1784 679 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1784 679 SUPERFAMILY Protein kinase-like (PK-like) 106 401 IPR011009 -
Bisa08g1784 679 MobiDBLite consensus disorder prediction 563 604 - -
Bisa08g1784 679 MobiDBLite consensus disorder prediction 478 495 - -
Bisa08g1784 679 MobiDBLite consensus disorder prediction 407 515 - -
Bisa08g1784 679 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1784 679 MobiDBLite consensus disorder prediction 496 515 - -
Bisa08g1784 679 Gene3D Transferase(Phosphotransferase) domain 1 195 434 - -
Bisa08g1784 679 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Bisa08g1784 679 MobiDBLite consensus disorder prediction 35 49 - -
Bisa08g1784 679 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Bisa08g1784 679 MobiDBLite consensus disorder prediction 456 477 - -
Bisa08g1784 679 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1784 679 MobiDBLite consensus disorder prediction 21 64 - -
Bisa08g1784 679 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Bisa08g1784 679 MobiDBLite consensus disorder prediction 415 445 - -
Bisa08g1784 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1784 Bisa-ChrBisa08 42703855 42709408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1784 104 428 Core Cell Cycle Gene Families AT5G10270 49.853 4.94e-112 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa08g1784 Pkinase 2.5e-68 CL0016