Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1777 ATGTCAGAGCAGAAAACAGAGTCATGGGCCTTCATCTTCCTCTGTTTCTTAATCCTTTTCTCAGGTAAAATTGTTGCCGGAGATTCTCTAAACACAGATAGAGAAATTCTGCTAAAGCTGAAATCATACCTGGACAATCAAACTCTGGCAGATCGAGGAAGATACATAAACTGGAACATAACCAGCTTGAATCCTTGTGAATGGCCAGGAATTTCTTGCAGCCACACATGGACAACCACGGCGACGGTGAGGGTGGTCGGCGTGGACCTCTCCGACAGCAACATATCCGGCAAGATTTTCGGGAACTTCTCGCAGCTCACTGAGCTCAAACACCTTGACCTCTCCAGAAACACCATGTCCGGAGAAATTCCAGAGGATCTAAGGCGATGCAGCAACCTCGAGTACCTCAATCTGTCGCATAATCTTCTTGGGGGAGAGATGAATTTGACTGGCTTGAGAAGGTTAGAGACACTGGACTTGTCGGAAAACAGGTTTCATGTGGACATAGGGTTGAATTTTCCTGCCATTTGTGACAATCTAGTCACTTTGAACGTTTCTGGGAATAACTTCACTGGCACAATTGATCGCTGCTTCGATCAGTGTTTGAAATTGCAGTACTTAGATTTGAGCACTAATGATCTGAGTGGGGATATTTGGATGGGATTTGCGAGGCTGAAGCAGTTCTCAGTTTCAGAGAATTTTCTCAGTGGGTCTATCAAGGAACAAGCTTTCCTGGAAAATTGTAACCTTGAAGTACTCGATGTTTCAGACAACGGGTTTTCAGGAAAAGCCCCGAAGAATGTCAGTAACTGCAAGAATCTAGTGATTCTGAATCTTTCAAGCAACAAATTTTTTGGGGATATTCCCATTGAACTGGGATCCATTTTTAAACTTCAAGGATTGTACTTGGCCAACAACAGTTTCTCGAGAAACATCCCAGAATCACTTTCAAGCTTGACCAAGCTAGAATTTTTGGATTTGAGCAGAAACAGTTTTGGTGGAGAGATACAAGAGACACTCGGGAGATTCAAGAAGGTGAAGTTCCTTATATTGCATTCAAATTCCTACACAGGAGGATTCAACTCTTCAGGAATTCTCAAATTACCAAGCATATCCCGCTTAGACCTTAGCAGCAACAAATTCTCAGGTCCATTACCAATTGAAATCTCTCAAATGTCTTCTCTAAAGTTCTTAATCTTAGCCCATAATAACTTCGCTGGACCTATTCCACTTGAGTTTGGAAATCTGACTCAGCTTCAAGCACTTGATCTCTCATTCAACAATTTAACAGGGCCAATCCCACAAACTCTTGGAAAACTGGGTTCTCTTTTATGGTTAATGCTTGCAAACAATTCGTTAACAGGAGAAATCCCCAGAGAGTTAGGAAACTGCACAAGCTTGTTGTGGCTGAATCTCGCAAACAATAAGCTCACTGGGAATTTTCCCTCTGAATTGACCAACATAGGAAGAAACGCCATGGCTACTTTTGAACTGAATCGAGAAGACACTGGGATCACTGCGGGTTCTGGTGAGTGTTTAGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCATCCTCACAAGGAAGAATTGCAGAAGCATTTGGAATAGACTTTTGAAAGGGTATGGTATTTTTTCGATTTGCTCATCAGGATCTTCTTTTCGATTACCCGAAATATCTGGGTATGTTCAGTTAAGTGGGAATAATCTAATTGGAGAAGTTCCTTTAGAGATTGGGAAGATGGAGAATTTCAGTATGTTGCATCTGGGGTTGAACAAATTTTCCGGGAAAATCCCTGAGGTGATGGGATATTTGCCACTTGTTGTGTTGAACATAACAAGAAACAATTTCTCAGGTGAGATTCCATGGGACATTGGGAACCTTAAATGTCTGAGGAATCTTGATTTGTCTTACAACAATTTCTCTGGAACATTCCCGACAAGCTTGAACAACTTGACCGAGCTCAGTAAATTAAATATCTCATACAATCCCTTGATTTCTGGCACAATCCCGCCCACAGGGCAATTAGCTACATTCGACAGAGATTCATATTTCGGAGACCCATTCTTGGACCTCCCAAACTTCATCGACAACGGCACAGACGATCAAAACCCAATATCTCACAGACACCAAAACCCCAAAAACCCCACAAAGCTGTCGATGTTCTTGGTGATCCTATCTCTAACTCTCGCTCTCTTGATATTCGGGCTCCTCTCTCTCATAATCTGCTTAATATTCAAAACCGCGTCACAAGACTCAGAAGAGTACCTCTTGGAAGACACAAAACACCGACACGATTCCACCAATTCCGGCAACTCGTCGCCGTGGTTGTCCGACACAGTCAAGGTTATCAGTTTGAACAAGACAGCATTCACCCACGCCGACATCCTCAAGGCCACCGGGAACTTCTCCGACGACAGGGTCATCGGAAAAGGAGGTTTCGGCACCGTGTACAGAGGAGTATTCCCCGACGGGAGACAAGTCGCGGTGAAGAAGCTTCACAGAGAAGGAGTCGAAGGAGAGAAGGAGTTTCGAGCCGAAATGGAAGTTGTTAGCGAACACCCCAACCTGGTAACGCTCTATGGGTGAGATGTTAAAGCTAGCAACGTGCTTTTGGATAAACAAGGGAAGGCGAAGGTGACGGACTTTGGGTTGGCCCGAGTGGTGGAAAACGGGGTTAGTCACGTGACCACTATGGTGGCAGGCACCGTGGGATACGTGGCACCCGAGTATGGTCTGTCGTGGCAGGCCACCACTAAAGGTGATGTATATAGTTTTGGAGTGGTGGCTATGGAGTTGGCTACCGGGAGGAGGGCGGTGGACGGAGGGGAGGAGTGCTTGTTGGAGTGGGCTCGACGGGTCATGGGCTATGGGTATGGGCTTGGGCTCAGTCGGCCTATGATACCAGTCTCGTTGATGGGGTTTGGACTCGACAAGGGGGCGGAGGAGATGGGTGAGTTGTTGCAGATTGGGGTGAGGTGCACGGCAGAGGCACCGCAAGCTCGTCCCAACATGAAGGAAGTTTTGGATATGCTTCTTAATATATCGGACCCCAAGGGTGACTTTAGGGTTGGGGTGCCTTGA 3105 0.456 MSEQKTESWAFIFLCFLILFSGKIVAGDSLNTDREILLKLKSYLDNQTLADRGRYINWNITSLNPCEWPGISCSHTWTTTATVRVVGVDLSDSNISGKIFGNFSQLTELKHLDLSRNTMSGEIPEDLRRCSNLEYLNLSHNLLGGEMNLTGLRRLETLDLSENRFHVDIGLNFPAICDNLVTLNVSGNNFTGTIDRCFDQCLKLQYLDLSTNDLSGDIWMGFARLKQFSVSENFLSGSIKEQAFLENCNLEVLDVSDNGFSGKAPKNVSNCKNLVILNLSSNKFFGDIPIELGSIFKLQGLYLANNSFSRNIPESLSSLTKLEFLDLSRNSFGGEIQETLGRFKKVKFLILHSNSYTGGFNSSGILKLPSISRLDLSSNKFSGPLPIEISQMSSLKFLILAHNNFAGPIPLEFGNLTQLQALDLSFNNLTGPIPQTLGKLGSLLWLMLANNSLTGEIPRELGNCTSLLWLNLANNKLTGNFPSELTNIGRNAMATFELNREDTGITAGSGECLAMKRWIPADYPPFSFVYSILTRKNCRSIWNRLLKGYGIFSICSSGSSFRLPEISGYVQLSGNNLIGEVPLEIGKMENFSMLHLGLNKFSGKIPEVMGYLPLVVLNITRNNFSGEIPWDIGNLKCLRNLDLSYNNFSGTFPTSLNNLTELSKLNISYNPLISGTIPPTGQLATFDRDSYFGDPFLDLPNFIDNGTDDQNPISHRHQNPKNPTKLSMFLVILSLTLALLIFGLLSLIICLIFKTASQDSEEYLLEDTKHRHDSTNSGNSSPWLSDTVKVISLNKTAFTHADILKATGNFSDDRVIGKGGFGTVYRGVFPDGRQVAVKKLHREGVEGEKEFRAEMEVVSEHPNLVTLYGXDVKASNVLLDKQGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGLSWQATTKGDVYSFGVVAMELATGRRAVDGGEECLLEWARRVMGYGYGLGLSRPMIPVSLMGFGLDKGAEEMGELLQIGVRCTAEAPQARPNMKEVLDMLLNISDPKGDFRVGVP 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1777 1034 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Bisa08g1777 1034 Pfam Leucine rich repeat 153 214 IPR001611 GO:0005515
Bisa08g1777 1034 Pfam Leucine rich repeat 89 143 IPR001611 GO:0005515
Bisa08g1777 1034 SUPERFAMILY L domain-like 223 484 - -
Bisa08g1777 1034 ProSiteProfiles Protein kinase domain profile. 734 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1777 1034 ProSiteProfiles Leucine-rich repeat profile. 132 153 IPR001611 GO:0005515
Bisa08g1777 1034 Gene3D Phosphorylase Kinase; domain 1 774 874 - -
Bisa08g1777 1034 SUPERFAMILY RNI-like 59 290 - -
Bisa08g1777 1034 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Bisa08g1777 1034 PRINTS Leucine-rich repeat signature 416 429 - -
Bisa08g1777 1034 PRINTS Leucine-rich repeat signature 204 217 - -
Bisa08g1777 1034 Pfam Leucine Rich repeat 247 262 IPR001611 GO:0005515
Bisa08g1777 1034 Pfam Protein kinase domain 871 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1777 1034 SUPERFAMILY L domain-like 569 679 - -
Bisa08g1777 1034 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 248 869 - -
Bisa08g1777 1034 FunFam Leucine-rich repeat receptor protein kinase MSP1 772 880 - -
Bisa08g1777 1034 SMART serkin_6 810 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1777 1034 FunFam Putative LRR receptor-like serine/threonine-protein kinase 343 504 - -
Bisa08g1777 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Bisa08g1777 1034 SUPERFAMILY Protein kinase-like (PK-like) 797 1023 IPR011009 -
Bisa08g1777 1034 SMART LRR_typ_2 319 343 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 440 464 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 106 130 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 368 392 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 416 439 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 635 659 IPR003591 -
Bisa08g1777 1034 SMART LRR_typ_2 152 172 IPR003591 -
Bisa08g1777 1034 Gene3D Ribonuclease Inhibitor 317 498 IPR032675 -
Bisa08g1777 1034 Gene3D Ribonuclease Inhibitor 557 702 IPR032675 -
Bisa08g1777 1034 Gene3D Transferase(Phosphotransferase) domain 1 875 1026 - -
Bisa08g1777 1034 Gene3D Ribonuclease Inhibitor 30 316 IPR032675 -
Bisa08g1777 1034 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1777 Bisa-ChrBisa08 42401469 42404997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1777 34 1027 Receptor kinase-like Gene Family AT4G39400 30.612 2.50e-105 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Bisa08g1777 Pkinase 3.7e-17 CL0016