Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1762 ATGTGGACGACGAAATTGCCCACTGGATATCGATTTATACCCACAGATGAAGATCTTGTGGTGCATTACTTGATGAACAAGGTATTAGACAAGCCTCTTCCTGCCCCTGTTGTTCAAGATCTTCAAGCCATTGAATTGTTTACGAAGCCTCCTAATCAATTCTGTGCAGCATGTGGTGGGGATGGACAGAGAGATTGGTTTTTCTTTCTTTTTGAAGATGAAAATTACAGAAATATGGAAGACATGTTTGAAGGATATTGGAGGAAATCAACTGACCAACTACACCACAGCTTTGAGGGATATTGGAGGAAATTAAGTGATGATATCTACAACATTTATGACTCTAATGGAAATCTGCTTGGGCTTAAAGAAATTTTTTGTTATTATATTGGAAAGGATGAAGAAACTGCAAAGAAAACTCATTGGAAACATGAAAAATATCGGTTATCCTCTTGTGAGGTACAAATTTCTAACTTGTGA 480 0.3708 MWTTKLPTGYRFIPTDEDLVVHYLMNKVLDKPLPAPVVQDLQAIELFTKPPNQFCAACGGDGQRDWFFFLFEDENYRNMEDMFEGYWRKSTDQLHHSFEGYWRKLSDDIYNIYDSNGNLLGLKEIFCYYIGKDEETAKKTHWKHEKYRLSSCEVQISNL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1762 159 Pfam No apical meristem (NAM) protein 7 149 IPR003441 GO:0003677|GO:0006355
Bisa08g1762 159 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Bisa08g1762 159 PANTHER NAC TRANSCRIPTION FACTOR 56 6 150 - -
Bisa08g1762 159 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Bisa08g1762 159 SUPERFAMILY NAC domain 4 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1762 Bisa-ChrBisa08 41974217 41975761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1762 6 157 NAC Transcription Factor Family AT1G61110 30.263 6.99e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa08g1762 NAM 1.5e-19 No_clan