Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1732 ATGATTCGGAATAATTCTAGAAAAGGTTATCATCATCATCAAGGGAAGCAAGAGGATCATGAAGATCAACATCACAATCACACCATTGATAATAACAGTATTGAGAATTTGTACCCTAAGGCAGCCTCTTCTTCTTCTACAAGGCAATGGTCCGGCCTGAGGAACCCGAGGATTGTCCGCGTTTCACGGTCGTTCGGGGGAAAGGACCGGCACAGCAAGGTGTGCACCATCAGAGGACTAAGGGACAGAAGGATTAGGCTGTCTGTGCCCACAGCAATTCAGCTGTATGACCTTCAAGACAGGCTTGGGCTGAGCCAGCCCAGCAAGGTCATTGATTGGCTCATTGAAGCCACAAAGCATGACATTGACAAACTCCCTCCCCTTCCAATCCCCCATGGCTTCCCTCAATTTCAACAAACCTTTCTTCCCAATGCTATTCCTATTCATAATTATGCCCATGAATCAGCTTCTATAGCCAATTCTTCTCTCGGAGCTTTCTTTGATGCTAATAGTTTCATGGATAAAGGGAAGTGGGTGAAGGGAAATAATAGTAATAATAATGGAGGAGAAGAGAATGAAGAAGATGGTGGTTCAGGTCATCAGCCTCAGAATCTATTCCCACTTGGGGCTAATTTTCTGAGCAATAACAGTGTGACATATACTAATAATAATAACAGTTCATACCATAATTCTGGGCCTTCTTCAAACCTATCTTTATTTGGAAGCCATGGGTTAGATACTTCCCATAGTAATGTGCAATTTCATCAACTCCCATCTCCTTTGTTTTATCCAACTTCTGCAGCTTTTGGACCTTACTATGCTCCATTCATGAACATGAACACGCCCAACTCTACTTCTTCCTTAGGGGAAGCTGAGGCAAGAGCACAACACTTGAACCATATTCAATGGTTGAGCCCAACTTCTTCTTCTCAAGTGTTAAATGCTCATCCCATTCCATCTCTCAAACCCCTCATTCCAACACTGCCTTTTAGTTCAAGGCTTCTTGACTTCGATCACAAGGACATTACTCTTTCTTGA 1038 0.4316 MIRNNSRKGYHHHQGKQEDHEDQHHNHTIDNNSIENLYPKAASSSSTRQWSGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLIEATKHDIDKLPPLPIPHGFPQFQQTFLPNAIPIHNYAHESASIANSSLGAFFDANSFMDKGKWVKGNNSNNNGGEENEEDGGSGHQPQNLFPLGANFLSNNSVTYTNNNNSSYHNSGPSSNLSLFGSHGLDTSHSNVQFHQLPSPLFYPTSAAFGPYYAPFMNMNTPNSTSSLGEAEARAQHLNHIQWLSPTSSSQVLNAHPIPSLKPLIPTLPFSSRLLDFDHKDITLS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1732 345 MobiDBLite consensus disorder prediction 178 192 - -
Bisa08g1732 345 ProSiteProfiles TCP domain profile. 67 125 IPR017887 -
Bisa08g1732 345 Pfam TCP family transcription factor 67 177 IPR017887 -
Bisa08g1732 345 MobiDBLite consensus disorder prediction 178 206 - -
Bisa08g1732 345 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 299 IPR005333 GO:0003700
Bisa08g1732 345 MobiDBLite consensus disorder prediction 1 30 - -
Bisa08g1732 345 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1732 Bisa-ChrBisa08 40928714 40929751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1732 14 232 TCP Transcription Factor Family AT5G60970 47.521 2.15e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa08g1732 TCP 4.3e-25 No_clan