Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1706 ATGCAGGAAATACATTCCATCGGAGGAGGCAGATTATTCGGCGCCGGAGCCGGCGCTGGAGACAGGAGGCAGAGGCCTCATCACCACCACAACAGCAATAACAACCAGAATCAGCAGGCCTTGAAGTGCCCGAGATGTGACTCCCTCAACACCAAGTTCTGCTATTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGAGCTGCCGGAGATACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCCGTTGGAGGCGGTTGCCGCAAATCCAAGCGCTCCAAACCTAAAACCTCGTCCTCGGAAACTTCCACCGGTGCTGCCGCCTCCGCAGCCACACCACCGCCAGCAGCACCACCGGCGCCGTCGTCGCAACCGAAGACGTCGAACTCTCATTCCAGCAGCGAAAGTTCCAGTCTCACCGCCGCCGCTGCAGCAGCTGTAGCCGCCTCAGAGGCATTATCAGCACCTTCATCCAACTCTGCGTCCAATAACTTGCTGGACAGTCTTCAGGATTCGAAGTTCTTCGTCTCGAACACTAGTTTCGAACCAGGCGCAATGGAGCAAGGAGACTCTGGGATTTTCTCGGAGATAGGGAACTTAACGAACTTGATCACATCCAGCACAAACGAGGCATTGGCGTTTGGATTTGGTAATATCCCTGATGCATCGTCGTTTCAGTTAAGCAGTCAGTGGCAGAAAGGGATGAACGTCAATGATCTTCATCAGGACTTGAAGTTCTCGGAGATGACGACGACGACGGCTGGATCGTTGCTTGATCAGGCGGTCCCGGTGGATTTGTCAGCGGTTCAAAATAAAATCGCGAACGGAGGATTCGGGCCGTTGGATTGGCAAGAGAGTACGGATCGAGGTTTGTTTGATCTTCCCAACACCGTAGATCAGTCTTACTGGAGTCACAGTCAGTGGAATCAAGACAATCATGGTCTCTTTCACCTACCTTGA 969 0.5356 MQEIHSIGGGRLFGAGAGAGDRRQRPHHHHNSNNNQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKTSSSETSTGAAASAATPPPAAPPAPSSQPKTSNSHSSSESSSLTAAAAAAVAASEALSAPSSNSASNNLLDSLQDSKFFVSNTSFEPGAMEQGDSGIFSEIGNLTNLITSSTNEALAFGFGNIPDASSFQLSSQWQKGMNVNDLHQDLKFSEMTTTTAGSLLDQAVPVDLSAVQNKIANGGFGPLDWQESTDRGLFDLPNTVDQSYWSHSQWNQDNHGLFHLP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1706 322 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 221 IPR045174 GO:0003700|GO:0006355
Bisa08g1706 322 MobiDBLite consensus disorder prediction 1 39 - -
Bisa08g1706 322 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Bisa08g1706 322 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Bisa08g1706 322 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Bisa08g1706 322 MobiDBLite consensus disorder prediction 85 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1706 Bisa-ChrBisa08 39929848 39930816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1706 21 322 C2C2-Dof Transcription Factor Family AT5G60850 41.558 9.18e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa08g1706 zf-Dof 2.5e-33 No_clan