Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1697 ATGGGGCGCTTGAGATTCCGTGATAGCGAGCTTACGGTGGTGAAATGGGTTTACCACGTGCCGGTTGCAATCCTATTTTGGGGGCATGACATGTTGCCAGAACATTTGTGGACAGTGTATGGGACTAGGATGTGCTCCCAGATGCCCCAGCCAATGCTTAGGACTAGGACGGGATTCGATGGCACATGCACGAAGGAATGGGTAACCAATTTCTCATTTCATGGCTACTTACCCATATTCTTCTTCCACCAAGGAAACCCATCGTGCGTCACACCAAAAACCAAGGAAATCCCTCTCAGACTGAGATGGCAACGAAGGTCGTTGAGGCATACAAGTAGCTCAAGAACAAGGTGTTGTGAAGGATTTGTGGAGAAGAACAAAGAAAAGCGAAAAGCAAAATAGCAAAGGATTCGAAAAGGAAAGGGAAGGCGAAAGAAAGAAAGATATATTTCTGGTCCACCTTCTCAGATTCTTCTGCTGTTCCGTTTTACTCATCGCCACTCCTGTTTCGGTCATCCATTTCATGCTTTGCTTCCACAGAGCCTTTCTCACTATCCTTATTCAACTTCACACTCCTATACTTGCAAAAGAAGAGGGAGAAATTTTAAAATGGAGCTTCCTCAAGCGCGTCCTTTTGGAATCCCAGGGAGAAGAAAACCCACGCATGACTTCCTGTCACTATACAGTCACTCAAGTGCCCAACAAGATCCTCCAAGGCCACCTTCTCAAGGAAGTTACCTCAAAACCCAGGATTTCTTGCAGCCACTAGAACGCAAAGAAGGGAAAGCTAGTTATAATACCAAGGAAGAAGCAGCGGAGGAAGTATCTTCGTTAGTTCAAAAGCCGCCACCTTCAGTTGAGCACCTGCTACCCGGAGGGATTGGGACTTACAGTATCAGTCACATTTCTTATTTTAATAACCAACGGATTTCAAAGTCACCGGAGGCATCGGTCTTCGCGGTGGCTCAAGCAAGTAGTACGGATAGGAATAACGAGAACTCTAATTGCAGTTCTTATACTGGAAGTGGTTTTACTTTATGGGAAGAGTCTGCAGTTAACAAGGGAAAAACAGGGAAGGAGAATACTGTGGTAGAGAAGCCCGTCTCAGGAGATTCTCCGGCAAAGCTAGGGCAGTGGGCGTTGGCGGAGCGAACTTCAAAATCGTATTCCACCACTCGTAACAACAGCTTCAACTCTCTTCCTTCCCATCAGTTATTAACATTCTGTGACTCTTGCTTTCTTTTTATAAGGTCAACTGGGCTGAAGAACAAGAGTTTAATTGAAATGATAAAATCCGCAAAGGACGATTTTGCTCAGGATGAGGAATTTGACAATGAAGAACCATTCACTCTTAAGAAAGAATGTCCCAATACCCAAATCGGAGAATTGAGAGTCAAATTTGATGGAAAGAGCCCTGATCAAAAGCCAAAAACACCACGATCAAAACATTCTGCAACGGAGCAGCGTAGAAGAAGCAAAATCAATGACAGATTCCAGATGCTAAGAGAGCTTATTCCACATAGTGAACAGAAGAGGGATAAGGCATCTTTTTTGTTAGAGGTCATTGAGTATATCCATTTTTTACAAGAGAAGGTGCATAAATATGAAGGGTCATATCAAGGGTGGAATCAGGAGGCAGAGAAATTGATGCCATGGCAGAGAAATAATCACAGGCCTGCTGAGAGTTATGTTGATCAATCTTGTGGGACAAATGGTGGGTCAGGTCCATCCCCATCGTTGATGTTTGCTTCCAAGTTTGATGAGAAAAGCATTACCATCTCCCCAGCATTTCCTGGGTGCACTCAGAATATAAAATCTGGCATGAGCCCTGCAACTACCATCAGGACAATAGATCAACATTGTGGAATAACGAACAAGACTATGCCAATCCCTGTTTCCTTAGGGTCAAATTTCATCACCTCAGCCCAAAGTGGTAGCCCAGATATAGTGTCTCAGCTTACACATAGATTGGCATCTGATGCAGAGAACAACATATATCAACCTTCAGAGTTGACCGCTGCTAATGATAAGCAGAAAGAGAAAGCGAACACTGTTGAAGATGGTGCCATTGGCATATCAAGTGCGTACTCAAAAGGGTTATTAAACTCACTGACACAAGCACTGCAGAGTTCAGGAGTGGATTTGTCGCTAGCCAGCATCTCTGTGCAAATTGAGCTTGCTAAGCAAGCAAACGTCAGACAATCTGTTCCAACGTTAGGTGCCAAGGATGATGAGTTTGTTTCCAGGAATCGAGGGATGACACACACTAGAGTTGTCGACACTGAAGACTCCGACCAACCATTGAAGAAGCTAAGAACACGCAAAAGCTAA 2331 0.4427 MGRLRFRDSELTVVKWVYHVPVAILFWGHDMLPEHLWTVYGTRMCSQMPQPMLRTRTGFDGTCTKEWVTNFSFHGYLPIFFFHQGNPSCVTPKTKEIPLRLRWQRRSLRHTSSSRTRCCEGFVEKNKEKRKAKXQRIRKGKGRRKKERYISGPPSQILLLFRFTHRHSCFGHPFHALLPQSLSHYPYSTSHSYTCKRRGRNFKMELPQARPFGIPGRRKPTHDFLSLYSHSSAQQDPPRPPSQGSYLKTQDFLQPLERKEGKASYNTKEEAAEEVSSLVQKPPPSVEHLLPGGIGTYSISHISYFNNQRISKSPEASVFAVAQASSTDRNNENSNCSSYTGSGFTLWEESAVNKGKTGKENTVVEKPVSGDSPAKLGQWALAERTSKSYSTTRNNSFNSLPSHQLLTFCDSCFLFIRSTGLKNKSLIEMIKSAKDDFAQDEEFDNEEPFTLKKECPNTQIGELRVKFDGKSPDQKPKTPRSKHSATEQRRRSKINDRFQMLRELIPHSEQKRDKASFLLEVIEYIHFLQEKVHKYEGSYQGWNQEAEKLMPWQRNNHRPAESYVDQSCGTNGGSGPSPSLMFASKFDEKSITISPAFPGCTQNIKSGMSPATTIRTIDQHCGITNKTMPIPVSLGSNFITSAQSGSPDIVSQLTHRLASDAENNIYQPSELTAANDKQKEKANTVEDGAIGISSAYSKGLLNSLTQALQSSGVDLSLASISVQIELAKQANVRQSVPTLGAKDDEFVSRNRGMTHTRVVDTEDSDQPLKKLRTRKS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1697 776 MobiDBLite consensus disorder prediction 749 770 - -
Bisa08g1697 776 FunFam BHLH domain class transcription factor 476 548 - -
Bisa08g1697 776 MobiDBLite consensus disorder prediction 253 269 - -
Bisa08g1697 776 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 478 528 IPR011598 GO:0046983
Bisa08g1697 776 CDD bHLH_AtBIM_like 478 553 - -
Bisa08g1697 776 MobiDBLite consensus disorder prediction 562 581 - -
Bisa08g1697 776 MobiDBLite consensus disorder prediction 562 578 - -
Bisa08g1697 776 MobiDBLite consensus disorder prediction 466 493 - -
Bisa08g1697 776 SMART finulus 484 534 IPR011598 GO:0046983
Bisa08g1697 776 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 476 550 IPR036638 GO:0046983
Bisa08g1697 776 Gene3D - 475 551 IPR036638 GO:0046983
Bisa08g1697 776 MobiDBLite consensus disorder prediction 462 493 - -
Bisa08g1697 776 MobiDBLite consensus disorder prediction 749 776 - -
Bisa08g1697 776 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 217 774 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bisa08g1697 776 MobiDBLite consensus disorder prediction 209 276 - -
Bisa08g1697 776 Pfam Helix-loop-helix DNA-binding domain 480 529 IPR011598 GO:0046983
Bisa08g1697 776 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1697 Bisa-ChrBisa08 39696584 39709377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1697 204 730 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 45.735 1.93e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1697 HLH 1.5e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1697 08 39696584 39709377 Bisa08g1697 08 39696584 39709377 ECH