Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1654 ATGGATCCCGACGCGTTCACCTCCAGCATCTTCAAGTGGGACCCACGCGCCATCCTCACGACTTCCTCGCTTAACCGCCCTCCGCTTCTCGAGTACGCTGTGCCTCCGCCGGCCGCGCCGGCTACGACCACGGCTGCCGTGGTGCGGGGGCCGAGGGAGCTGGGAGGGCTGGAGGAGCTGTTCCAGGCTTACGGTATAAGGTTCTTTACAGCGGCAAAGATCGCCGAGCTCGGGTTCACGGTAACCACTCTCGTGAACATGAAGGACGAGGAGCTGGACGAGATGATGAATAGCTTGTCTCAGATTTTCCGTTGGGATCTCCTCGTCGGGGAGCGATACGGCATCAAAGCCGCCGTACGAGCCGAACGACGTCGGATTGACGACGAGGACATGCGCCGTCGCAACCTCCTCTCCGCCGACACAACCACCACCACCACAAACGCTCTTGACGCTTTGTCCCAAGAAGGGTTGTCGGAGGAGCCGGTGGTGCAACAAGAGAAAGAGGCGGGAGGGAGCACGTGGGAGGTGGTGGTTGCGGCGGAGAGGAAGAAGCAGAACCAGAGGAGGCGGAGGACGAGGATGAAGGCGAGTCAGCGTCAGCACCACGACGACGAGAACGAGGATGGAGAAGAAGAGATCGAAGTAGAGGATAACGAAGAAGGAAACCATAATGTTAACGGAGGATCATGCGAGAGACAGCGAGAGCACCCGTTCATTGTGACGGAGCCTGGGGAAGTGGCACGCGGCAAAAAGAACGGCCTCGATTATCTGTTCCACCTCTACGAGCAGTGCCGCGAGTTCTTGATCCAAGTCCAAAACATCGCCAAGGAGCGTGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGGGCGAGCTACATTAACAAACCGAAGATGCGACATTATGTGCACTGTTACGCGTTACATTGTCTGGACGAGGAGGTTTCGAACGAGCTGAGGATGGGGTTTAAGGAGAGAGGCGAGAACGTTGGAGCGTGGAGGCAAGCATGCTACAAGCCGCTAGTGGCGATCGCAGCGAGACAAGGTTGGGACATCGATGCCATATTCAACGCGCATCCCCGTCTGTCGATATGGTATGTCCCGACCAAGCTCCGGCAGCTTTGTCACTCCGAGAGGAATAGCGCCGCCGCAGCAGCAGCCGCCGCCGGAGGAGCTTCGAGTTCTGTCTCTATGGGCAGTGCTCACCTGCCTTTCTGA 1242 0.5813 MDPDAFTSSIFKWDPRAILTTSSLNRPPLLEYAVPPPAAPATTTAAVVRGPRELGGLEELFQAYGIRFFTAAKIAELGFTVTTLVNMKDEELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDEDMRRRNLLSADTTTTTTNALDALSQEGLSEEPVVQQEKEAGGSTWEVVVAAERKKQNQRRRRTRMKASQRQHHDDENEDGEEEIEVEDNEEGNHNVNGGSCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRMGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHSERNSAAAAAAAAGGASSSVSMGSAHLPF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1654 413 PANTHER PROTEIN LEAFY 1 401 IPR002910 GO:0003677|GO:0006355
Bisa08g1654 413 Pfam Floricaula / Leafy protein SAM domain 53 130 IPR035079 -
Bisa08g1654 413 MobiDBLite consensus disorder prediction 152 235 - -
Bisa08g1654 413 Gene3D Protein LEAFY 228 397 IPR038276 -
Bisa08g1654 413 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 227 391 IPR035209 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1654 1 409 Orphan Transcription Factor Family AT5G61850 63.488 1.40e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Bisa08g1654 C_LFY_FLO 5.8e-107 CL0123