Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1644 ATGCAAATCGACAGCCTCGAGGATTCGCCGATGTTCCGGCAACAGATACAAAACTTGGAAGAAAATGCAGACTCATTGAAAGCCAGATGCTGGAAGTTCTACAAGGGCTGTCGAAAGTACACGGAAGGACTTGGAGAGGAATCTGAAGGGGACATAGCATTTGCAAATGCCCTTGAAATTTTTGGAGGAGGGCCTACTGATCCTCTTTTCGAAGTTTTGGGAGGATCTATTATGACCAAATTCACTGTTGCTTTGAGAGAAATCAGTACATATAAGGAACTTCTTCGGTCACAGGTGGAGCACATGCTGAATGACAGATTAGAACACTTTCTCAATGTTGACATCCATGATGCCAAGGAATCTCGAAAGCGTTTTGACAAAGCCTCCCTTCAATATGATCAGGCACGTGAAAAGTTTCTATCATTGAGGAAGAGTGCTAAGCTTGATACTGTTGCTATAGTAGAAGAGGTTGGTGCTCTCAACCATGTTGAAGCCAAGAAGAGATTTGAATTTTTGGAGGCTGTCCCTGGAATTATGGATGCTCATCTTCGATATTTTCAACAGGGGTATCAGCTACTGCTGCAGATGGAACCTTACATTAGCGAGGTTTTGACTATTGCACAACAGTCCAGAGAAAGATACAATACGGAGCAGATCTCTCTTCTTGAAAGAATTCAGGAGTATAAAAATCATGTTCATCAAGATTGTAAGCTGATTGCTAATAAAGACATGCAGCCTTTTTCTAGGATACCAAATGAAGTGGTCGATGCAGTAATGGAATCTGCTGCCAATGGAACGGTTCAAATTCTTCGACAAGGATATCTTTCAAAGCGATCCTCCAATCTGAGAGGTGGATGGAAGAGAAGGTATTTTGTTCTCGACAGTCGAGGAATGTTATACTACCATCGAAAACCAGGGAACTGGTTGCACGGTGTCAATCAACCAACTGGACCAAGGACGGGTGCCACTGAAATTGGTTCTGGGCTTTTGAGCCGTTTTGCTCATCATCATGGGGTGGTCAATGATGACAAATCTACAAAACGTGGAGCAGTGAACTTGCTCACGTCAACAATTAAGGTTGATGCTGAGCAGTCAGATTTAAGATTTTGCTTCAGGATTATTTCGCCATCAAAAAACTGCACATTGCAGGCAGAAAATGTGAGTGACCAAATGGATTGGATTGAAAAGATAACTGGAGTAATTGCCTCCTTGTTGAGTGCCCAGACACTAGATATGCCTATGTCAGCTGACTCAGACAGCAGCGACAGTCACTCTTCCTCCAAGAATATGTTAGAAACTCCTCCAGGTGATGATCGGGTAGTGACTGAGGCACATGCATCTAAGAACTCTACCTCTCAAATTTTGCAGTCGCAAAAACAGAGTGTAAAAAGTGAAAAGCCAATTGATGTTCTTAGAAGGGTATGTGGAAATGACAAATGTGCTGATTGTGGTAAACCTGATCCAGACTGGGCATCCTTGAACCTTGGCATTCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGAGTACATATATCAAAAGTAAGGTCACTTACACTTGATGTAAAAGTCTGGGACTCCTCTGTTTTACGCATGTTTCAGTCGCTGGGCAATCTCTTTGCAAACTCAGTTTGGGAGGAGCTTTTGCAGTTACCAAGTGATTCGCAAGCTGATGATGCACCTGTTGGTTCATCAAAGGTGAAGAAAAATAATTCATTTCTTGCAAAGAAACCAGAACCTGATGATCCTATTTCATTGAAGGAGAAGTTTATTCATGCGAAGTATGTGGAGAAACTCTTTGTTAACCGGAAGAAGCAAAGTGATCAAATACGTTCGCTGGAAAAAGAGGTGTGGAAAGGCATCTGTGCAAACGACAAGAAAGCAGTGTACCGGCATATTGTCGTGTCAGATGTAGATCTCAATGCTATCAGTCAGCAACCAACATATGGTGACTCAGACTTGCCTTCTTCGAGTAACATAGACTCATTATCCAAAACTGAAAATCAGCCAATGGAGGGTAGACAAGATAGTTCTAGCGTTCAGGCGAAAGAAAAACAGAGTTCTAGAGTTCAGGCCAAAGAAAGGCAGAGTTCTAGCGTTCAGGCCAGAGAAAAACAGAGTTCTAGATTTGAGGCCAGAGAAAAACAGAGTTCAAGCCTTCAGGCCAGAGAAAAACAGAGTTCTAGCGTACAGACCAGAGAAAAGCAGAGTTCTAGCGTTCAGGCCAGAGAAAAACAGACTTCTAGTGTGCTTCACCAGGCATGTTTAACTTCTGATGCGAGTATGGTGGAGCTTCTTCTACAGTATGGTGCAGACGTAAATGCTTCAGATTCAAGAGGTCAGACACCATTGCATTACTGTATAATCAGAGGCAAGAGCGCAGCTGCAAGATTGCTTTTTATGAGTTTTAAGCTGTCCGCAGACTTTTCGTCTTTTGCCCTTGTTTCTACCGTGTCTTACTTGCTAAAAAGTGGCCTCCCTCAGCACCACAAGGAATCCTGGGAACAAAACCAATCCGAGTCCAGTGGTAATAACGTGTCCATATCAGTAACTAGGCCGTTATTGTGTCCCATTTATCTCCAGAATCTCTATCTTCGTCAACCCACTGAGAAAGAGCTGCCCTTCCCATCCATTGTCAGTTTAGTAGTTGTGCACCTCCACGTATTCGGTCCAGGAACACTTGGTTCATTGATTCACTTTTGA 2709 0.4289 MQIDSLEDSPMFRQQIQNLEENADSLKARCWKFYKGCRKYTEGLGEESEGDIAFANALEIFGGGPTDPLFEVLGGSIMTKFTVALREISTYKELLRSQVEHMLNDRLEHFLNVDIHDAKESRKRFDKASLQYDQAREKFLSLRKSAKLDTVAIVEEVGALNHVEAKKRFEFLEAVPGIMDAHLRYFQQGYQLLLQMEPYISEVLTIAQQSRERYNTEQISLLERIQEYKNHVHQDCKLIANKDMQPFSRIPNEVVDAVMESAANGTVQILRQGYLSKRSSNLRGGWKRRYFVLDSRGMLYYHRKPGNWLHGVNQPTGPRTGATEIGSGLLSRFAHHHGVVNDDKSTKRGAVNLLTSTIKVDAEQSDLRFCFRIISPSKNCTLQAENVSDQMDWIEKITGVIASLLSAQTLDMPMSADSDSSDSHSSSKNMLETPPGDDRVVTEAHASKNSTSQILQSQKQSVKSEKPIDVLRRVCGNDKCADCGKPDPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDSSVLRMFQSLGNLFANSVWEELLQLPSDSQADDAPVGSSKVKKNNSFLAKKPEPDDPISLKEKFIHAKYVEKLFVNRKKQSDQIRSLEKEVWKGICANDKKAVYRHIVVSDVDLNAISQQPTYGDSDLPSSSNIDSLSKTENQPMEGRQDSSSVQAKEKQSSRVQAKERQSSSVQAREKQSSRFEAREKQSSSLQAREKQSSSVQTREKQSSSVQAREKQTSSVLHQACLTSDASMVELLLQYGADVNASDSRGQTPLHYCIIRGKSAAARLLFMSFKLSADFSSFALVSTVSYLLKSGLPQHHKESWEQNQSESSGNNVSISVTRPLLCPIYLQNLYLRQPTEKELPFPSIVSLVVVHLHVFGPGTLGSLIHF 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1644 902 SMART arf_gap_3 465 610 IPR001164 GO:0005096
Bisa08g1644 902 Pfam PH domain 270 401 IPR001849 -
Bisa08g1644 902 MobiDBLite consensus disorder prediction 723 750 - -
Bisa08g1644 902 CDD ArfGap 468 597 - -
Bisa08g1644 902 Gene3D - 261 415 IPR011993 -
Bisa08g1644 902 SMART 5bar 5 202 IPR004148 GO:0005515|GO:0005737
Bisa08g1644 902 MobiDBLite consensus disorder prediction 648 707 - -
Bisa08g1644 902 MobiDBLite consensus disorder prediction 413 439 - -
Bisa08g1644 902 Gene3D Arf GTPase activating protein 444 612 IPR038508 -
Bisa08g1644 902 Pfam Ankyrin repeats (many copies) 750 801 IPR002110 GO:0005515
Bisa08g1644 902 SUPERFAMILY BAR/IMD domain-like 4 291 IPR027267 -
Bisa08g1644 902 ProSiteProfiles Ankyrin repeat profile. 748 780 IPR002110 GO:0005515
Bisa08g1644 902 Coils Coil 598 618 - -
Bisa08g1644 902 ProSiteProfiles PH domain profile. 268 402 IPR001849 -
Bisa08g1644 902 CDD BAR_SFC_plant 15 199 IPR035670 -
Bisa08g1644 902 MobiDBLite consensus disorder prediction 708 722 - -
Bisa08g1644 902 SUPERFAMILY Ankyrin repeat 737 831 IPR036770 -
Bisa08g1644 902 Pfam Putative GTPase activating protein for Arf 468 605 IPR001164 GO:0005096
Bisa08g1644 902 Pfam BAR domain of APPL family 4 216 IPR004148 GO:0005515|GO:0005737
Bisa08g1644 902 ProSiteProfiles ARF GTPase-activating proteins domain profile. 465 610 IPR001164 GO:0005096
Bisa08g1644 902 SMART ANK_2a 748 777 IPR002110 GO:0005515
Bisa08g1644 902 SMART ANK_2a 781 811 IPR002110 GO:0005515
Bisa08g1644 902 SUPERFAMILY ArfGap/RecO-like zinc finger 465 605 IPR037278 -
Bisa08g1644 902 Coils Coil 9 29 - -
Bisa08g1644 902 CDD PH_ACAP 271 406 - -
Bisa08g1644 902 PRINTS HIV Rev interacting protein signature 477 496 IPR001164 GO:0005096
Bisa08g1644 902 PRINTS HIV Rev interacting protein signature 496 513 IPR001164 GO:0005096
Bisa08g1644 902 PRINTS HIV Rev interacting protein signature 519 540 IPR001164 GO:0005096
Bisa08g1644 902 Gene3D - 677 834 IPR036770 -
Bisa08g1644 902 ProSiteProfiles Ankyrin repeat region circular profile. 748 779 - -
Bisa08g1644 902 SMART PH_update 269 404 IPR001849 -
Bisa08g1644 902 MobiDBLite consensus disorder prediction 413 432 - -
Bisa08g1644 902 Coils Coil 118 138 - -
Bisa08g1644 902 Gene3D Arfaptin homology (AH) domain/BAR domain 3 234 IPR027267 -
Bisa08g1644 902 PANTHER CENTAURIN/ARF 5 803 IPR045258 GO:0005096
Bisa08g1644 902 MobiDBLite consensus disorder prediction 648 750 - -
Bisa08g1644 902 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 447 611 - -
Bisa08g1644 902 SUPERFAMILY PH domain-like 269 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1644 Bisa-ChrBisa08 38341648 38354119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1644 477 603 C2H2 Transcription Factor Family AT4G21160 42.969 5.89e-22 96.7