Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1639 ATGATGCCTAGAGTAAACGGCGTCGCTTGGATGGACGATACGAGAGAAAACAACGACTCTAGTACTCCATCTTCATGGGCTAACGCTAACGCTAATGCCAACAGTCTTAACACCGGCATCGACAAAAGTCAGAACCAGAACCAGAACCATTCTGGGTTTGTTGAGCACATGTTTGAAATAGATGAGGATTGGTATATGGCGAATAATACTATCCAAAATCATCACTCAGATATCACTTTCTCTTCCAACTTCGCTGACCCCGAAGGTCTTTTGATGAACCCGGTGGACTCGTCCTCTTCTTGCTCTCCATCTTCCTCTGTATTCAACAACCTCAACCCATCCTCTCAGGTTCCGTACTTTCTTCCTCCAAAACCCACCTTGTCCTCTCTTCTCAATGTCGTCTCTGGTAATAATAGCCCCTTAGACCAGGGCTTCGATGTGGGGTTTCTTGATCCTCAAGGTTCTAGCTCTAGCCTTCTGCGAGGCTTCACCGATTTCAGCTCAAACACCAATTTGAGCCTTCCAAATTTGTGCGCAGATCCGCAAGTACCCCAATCGGGTATGCCCCAAATACCCGAAACCAGTTTCTCGGGTTTTCGGACCCTTGAAGAAGGTTCTGGAAAATCGCTGTTTCTAAATCGAGCCAAATTACTGAGACCCCTCGATTCGTTGCCGCCATCGGGAGCCCAACCCACTCTATTTCAGAAGCGAGTGGCTCTTCGGAAGAACCTAGCGAGCAACGATAGAGGGAAGAATGAGATTGAACAAGGGAACGAGAAGAAGAAGAGGAAGATGGGTAATTGGGAAGACGTGGAAGACGCTAGCTTTGATGGGTCGGAGCTGAATTACGATTCCGATGAGTTGACGGAGAATAACAGGACGGAAGAGATTTCGAAGAATGGCGGAAACAGCTCGAATGCGAACAGTACGGTGACCGGTGAGAAGGGGAAGAAGAAGGGAATGCCAGCGAAGAATTTGATGGCTGAACGACGTCGTAGGAAGAAACTCAATGATAGACTGTATATGCTCAGATCCGTCGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGATGCAATAGAGTACTTGAAGGAGCTTCTGCAAAGAATCAATGAGCTCCATAACGAGCTGGAATCATCATCTTCAACACCTGCTGCCTCTTCTCTCACCCCTGCCTCAAGCTTTCACTCTCTCACACCCACTCCTTCTTCGTTGCCAAGCCCTAATGGCCACCCTCCAAGGATAGAGGTTCGATTGCGAGATGGAAGAGCAGTAAATATTCACATATTCTGTGGTGGGAAGCCTGGTCTGTTGCTTTCAACCATGAAAGCTTTGGACAGCCTCGGATTAGATATCCAGCAAGCTGTTATTAGCTGTTTTAATGGTTTTGCTATGGATATCTTTCGAGCTGAGCAATGCAAGGAAGGTGAAGATGTGCATCCGGATCACATCAAAGCGGTACTGTTGGATTCAGCCGGCTTCCATGGCTGCATCTAG 1506 0.4754 MMPRVNGVAWMDDTRENNDSSTPSSWANANANANSLNTGIDKSQNQNQNHSGFVEHMFEIDEDWYMANNTIQNHHSDITFSSNFADPEGLLMNPVDSSSSCSPSSSVFNNLNPSSQVPYFLPPKPTLSSLLNVVSGNNSPLDQGFDVGFLDPQGSSSSLLRGFTDFSSNTNLSLPNLCADPQVPQSGMPQIPETSFSGFRTLEEGSGKSLFLNRAKLLRPLDSLPPSGAQPTLFQKRVALRKNLASNDRGKNEIEQGNEKKKRKMGNWEDVEDASFDGSELNYDSDELTENNRTEEISKNGGNSSNANSTVTGEKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINELHNELESSSSTPAASSLTPASSFHSLTPTPSSLPSPNGHPPRIEVRLRDGRAVNIHIFCGGKPGLLLSTMKALDSLGLDIQQAVISCFNGFAMDIFRAEQCKEGEDVHPDHIKAVLLDSAGFHGCI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1639 501 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 384 IPR036638 GO:0046983
Bisa08g1639 501 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 320 369 IPR011598 GO:0046983
Bisa08g1639 501 MobiDBLite consensus disorder prediction 381 416 - -
Bisa08g1639 501 FunFam BHLH transcription factor 316 384 - -
Bisa08g1639 501 Gene3D - 314 385 IPR036638 GO:0046983
Bisa08g1639 501 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 181 497 - -
Bisa08g1639 501 CDD bHLH_AtAMS_like 323 381 - -
Bisa08g1639 501 CDD ACT_UUR-ACR-like 430 490 - -
Bisa08g1639 501 MobiDBLite consensus disorder prediction 244 324 - -
Bisa08g1639 501 MobiDBLite consensus disorder prediction 295 313 - -
Bisa08g1639 501 MobiDBLite consensus disorder prediction 13 48 - -
Bisa08g1639 501 MobiDBLite consensus disorder prediction 381 407 - -
Bisa08g1639 501 MobiDBLite consensus disorder prediction 1 48 - -
Bisa08g1639 501 Coils Coil 359 386 - -
Bisa08g1639 501 Pfam Helix-loop-helix DNA-binding domain 327 369 IPR011598 GO:0046983
Bisa08g1639 501 MobiDBLite consensus disorder prediction 244 271 - -
Bisa08g1639 501 SMART finulus 326 375 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1639 Bisa-ChrBisa08 38269430 38272422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1639 60 474 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 47.702 1.75e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1639 HLH 1.8e-09 No_clan