Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1636 ATGAACTGGCCGACATGGCGGAAACGGGCGGCCATGGCAATGGCCGTAGTAGTGTTGCTTCAGGTGGGTTTTTCGTTGGAGGATGCCCATGCTCTCTCTTCTGATGGAGATGCGATTCTCCGGCTTCCTGGGCAACCCGAAGTTCGATTCCGACAGTTCTCGGGATACGTGGAAGTCGACGATAAGGATCAGAAGGCTCTGTTCTACTATTTTGTTGAATCAGAAACCGATCCAACTTCGAAGCCTCTGGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTTTCGGAGTAGGTGCATTCTCTGAAAATGGGCCTTTCAGACCAAATGGGGAAGTCCTGATTGAGAATAAATATAGTTGGCACAGAGAGGCAAACGTATTGTATTTGGAGACACCAGTGGGAGTAGGGTTCTCTTATGCTAATGGTAACTCCTCCTATTTGACGGTAAATGACGAGACAACAGCCAGGGACAACCTTGTATTCCTGAAACGCTGGTTCAACAAATTCCCCCAATACAGGCACAGGGACTTGTTTCTGACTGGGGAAAGTTATGCAGGACATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAGTCAACGAAGAGGGGAAGATATTCAATCTTAAAGGCATAGCTTTGGGTAATCCACTTCTTGAATATGCCACGGACTTCAATTCGAGGGCTGAGTTCTTCTGGTCTCATGGATTAATATCAGATTCAACGTACAGAATGTTCACAACAGTGTGTAATTATTCTCGGTACGTTATTGAATACTACAGAGACGCTGTTTCGCCTCCTTGTTCGAAGGTTATGCAACAAGTAGGCAGAGAAACTAGTAAGTTTGTGGACAAGTACGATGTTACCCTTGATATTTGCATATCATCAGTGCTTTCACAGTCCAAGGTCATTTCTCCACAATCCCAACAAGAAAATGAGATGGTTGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTACAAGACGCTCTCCATGCCAGGCTTGTTGGAGTTCAAAAGTGGGATGTCTGCAGCGACATTCTGGACTATGATATGCTCAACCTGGAAGTGCCTACACTGCCTCTCGTTGGATCACTAGTAAAAGCTGGAATTCGAGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTCACTGGGAGTCGCACCTTAGTCCAGAAACTGGCAAGGCAATTAGCACTTAATACAACAGACCCTTACAGAGCATGGTTTGCAGACCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCTACCGTGAGAGGAGCCTCCCACGAAGTTCCATTCTCGCAGCCTGAGAGATCGCTTGTGCTATTCAAGTCATTCTTGGGCGGCAGGCCTCTACCTGCTAAAATCTTGACACAAAATGAAGAAAAGGCTCTTGTCCTTTGCCATGGTATGAATCAGTGCACCATCTCTGTAAAATGCAAGGATGTAGCTAAAGGTGCTAACTTTCTGCAGAACCATTTGGTGCTTAATGCAGAAAACTGTGCAGGAACAGTGAGAAACATGCTTGGACTGAAGTGGTTGAATTTGGGAGTCTTTTCTCGTACAAAGTGTCAACAATGA 1623 0.4492 MNWPTWRKRAAMAMAVVVLLQVGFSLEDAHALSSDGDAILRLPGQPEVRFRQFSGYVEVDDKDQKALFYYFVESETDPTSKPLVLWLNGGPGCSSFGVGAFSENGPFRPNGEVLIENKYSWHREANVLYLETPVGVGFSYANGNSSYLTVNDETTARDNLVFLKRWFNKFPQYRHRDLFLTGESYAGHYVPQLAKLMIEVNEEGKIFNLKGIALGNPLLEYATDFNSRAEFFWSHGLISDSTYRMFTTVCNYSRYVIEYYRDAVSPPCSKVMQQVGRETSKFVDKYDVTLDICISSVLSQSKVISPQSQQENEMVDVCVDDKVTNYLNRKDVQDALHARLVGVQKWDVCSDILDYDMLNLEVPTLPLVGSLVKAGIRVLIYSGDQDSVLPLTGSRTLVQKLARQLALNTTDPYRAWFADQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLGGRPLPAKILTQNEEKALVLCHGMNQCTISVKCKDVAKGANFLQNHLVLNAENCAGTVRNMLGLKWLNLGVFSRTKCQQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1636 540 Gene3D alpha/beta hydrolase 34 295 IPR029058 -
Bisa08g1636 540 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Bisa08g1636 540 Gene3D - 364 463 - -
Bisa08g1636 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 450 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 Pfam Serine carboxypeptidase 44 462 IPR001563 GO:0004185|GO:0006508
Bisa08g1636 540 Gene3D - 318 354 - -
Bisa08g1636 540 FunFam Carboxypeptidase 32 467 - -
Bisa08g1636 540 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Bisa08g1636 540 FunFam Carboxypeptidase 364 463 - -
Bisa08g1636 540 SUPERFAMILY alpha/beta-Hydrolases 42 467 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1636 Bisa-ChrBisa08 38164343 38168594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1636 326 466 Calmodulin-binding Proteins AT2G22960 29.078 5.19e-18 80.5