Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1627 ATGGCAGCTTTTTCTCACCCCCAATCCCATTCTCTTCTTCTTCTTCACCCTTCTTCCCCATCCCTACTGTCACCTTCTTCAGACCCACCTCTTATAAATAACACTCCCCAATTACCCCCTCCTCACCACATTTCTTCAGACCTCAATCATAAGGACCAAAACTCCACCATGACTTTTAGCGAGGATTTTCGGCCTTCCGTCGCCAGAATCCATGACGCCTCCATGGTTGTGAATGGCAACATCGACGACGTTGCTGGGCAGGACAACAATTGGAGAAATTGCACAAATGGGTCTTCTTCAGACCAATTACCCCTTGTTCGCCACATTTTTTCAAACCCCAATAGTAGTCACCAAACGTCCAACTTGACTTTTAGCGACGACTTTAGGCCGCTTTCCGTCGCCAAGAACCCCAGTCCTGACACCTCCATGGTTGTGAATGGCCAGCACGACGTCGTTCGGAAAGACAAGAAGAGGAGAAATTGCAGAAATAGATCTCCGTCCAAGGAGCCGGCAGAAGGAAGAAACAAGAAGCAGAAGAAAAGCCATGTTGGTGGTGTTAAAGAAGAGAAAAAACCGAAAGAAGAGAATAAAATTACAAAAGAGCCCCCGGCAGGGTATATCCATGTCAGAGCAAGAAGGGGTGAGGCAACGGATAGCCACAGCCTCGCTGAAAGGGTGAGAAGGGAGAAGATTAGTGAGAGGATGATGATGTTGCAGCGACTTGTGCCAGGTTGTGATAAGTTCTTGTCGATGAAGCTTGCTTCTGTGGATCCCATGTTCGGTAACTTTACAAACGAGCTAAACACCCTCATGCCTACATCAGAAAGTTTAAACAGCACATCATTGCCTCTACCATCTGTACCACAATACAGCATGGATCAGGTTCCGGCCCCAAATTTTGGTGGTGACTATCTCTGGGACAATTCAGCTTCAGTTTCACTTCAAGGACACGTGTCAAACACCTTCTCCTCGGAGGATGATGGTAGTCAGTTCTGGGACGTAGAAGACCAACGACAGAAGTTTCTTACTCCTTATGGCTTCAGCGACAACTCATGTTACTATTAA 1065 0.4704 MAAFSHPQSHSLLLLHPSSPSLLSPSSDPPLINNTPQLPPPHHISSDLNHKDQNSTMTFSEDFRPSVARIHDASMVVNGNIDDVAGQDNNWRNCTNGSSSDQLPLVRHIFSNPNSSHQTSNLTFSDDFRPLSVAKNPSPDTSMVVNGQHDVVRKDKKRRNCRNRSPSKEPAEGRNKKQKKSHVGGVKEEKKPKEENKITKEPPAGYIHVRARRGEATDSHSLAERVRREKISERMMMLQRLVPGCDKFLSMKLASVDPMFGNFTNELNTLMPTSESLNSTSLPLPSVPQYSMDQVPAPNFGGDYLWDNSASVSLQGHVSNTFSSEDDGSQFWDVEDQRQKFLTPYGFSDNSCYY 354
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1627 354 MobiDBLite consensus disorder prediction 16 56 - -
Bisa08g1627 354 MobiDBLite consensus disorder prediction 162 222 - -
Bisa08g1627 354 MobiDBLite consensus disorder prediction 133 222 - -
Bisa08g1627 354 Gene3D - 206 257 IPR036638 GO:0046983
Bisa08g1627 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 213 247 IPR036638 GO:0046983
Bisa08g1627 354 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 116 247 IPR024097 GO:0006355
Bisa08g1627 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 215 267 IPR011598 GO:0046983
Bisa08g1627 354 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa08g1627 Bisa-ChrBisa08 37929541 37932896 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1627 157 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 47.887 7.01e-30 114