Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1623 ATGAAAGTTTCCGAGACCGATCCTGTCAATCTCTGTATTCAGCTTCTGTCTTCTCTTTTGGAAGAAATTCCTACTGTTCTTAACTTCAAAGGTAAATGGTCTCTGATTAGAGCAAAACTCACCGATCTTCAGACTCAACTCAACGATTTCTCCTCCGAGTTTCCTAATTACTCCTCCCATTCTCTGTCACTCGAGTTGCTTCAGTCTATTTCGCACACACTAAGCGATGCCGTTTCACTTGCCAAAGATTGCCAGTCCCCAAACTTATCTCAGGGCAAGCTTAAAACCCAGAGTGACATTGATTCGGTCCTCGCTAAGCTGGATCGCCATGTTAAGGACTGCGAGATTCTGATCAGAAGTGGTGTGCTGCAAGACGGCGCCGTTTCTAGCTCGTCTAAGAGGGAGGCCGTACGGTCTGAGTCCAGGAACTTTATTACACGTTTGCAAATCGGTTCTGCTGAGTCGAGGAAGTCGGCGATGGACTCGTTGTTGGGGTTACTCGAAGAGGATGATAAGAATGTGGTGATAGCTGTGGCACAGGGTGTGGTTCCGGTGCTCGTACGGTTACTCGACTCGGCCTCTTCCGAGATGAAGGAGAAGACTGTTGCTGCTATCTCCCGGGTTTCCATGGTGGATAGTAGCAAGCATGTTTTGGTCGCTGAGGGTTTGTTGCTTTTGAATCAATTGGTTCGAGTTCTCGATTCCGGGAGTGGGTTTGCCAAACAGAAAGCTTGTATTGCCCTGCAAGCTCTGAGTTTTTCCAAAGAGAACGCGAGGGCAATTGGGTCTAGAGGTGGAATCTCCTCACTATTGGAGATTTGTCAAGCCGGTACGCCTGGTTCCCAAGCTTCGGCAGCTGGGGTTTTGAGAAATCTTTCAGTCCTCCCAGAAATCAGAGAAAATTTTGTCGAGGAAGATACTGTTGTTGTCTTATTGGGGCTCGCCTCTTCGGGAACTGCTTTAGCCCAAGAAAATGCAATTGGGTGTTTGTCCAATTTAATTTCCGAAGACGAAAGTTTGAAACTTCTCTTTGTAAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCAGCTCCAGCAGTTCAGAGTCTTGAAGTCGCAGTTGATTTGTTGAAGCACCTGGCTTCTAGTGCACCGGTTGCTGAAGTTCTTGTTTCTGATGGGATTATACCTCGCCTTATGGGTGTGTTAAATTGTGGAATACTAGGGGTGAGAACTGCGGCGGCTCGAGCTGTTTATGCTTTGGGGTTCAGCAGCACCAAGACGAGGAAAGAGATGGGTGAATGTGGATGTACTACCCCATTGATCAAGATGCTGGATGGTAAGGCTGTAGAAGAGAAAGAAGCAGCTGCAAAGGCGTTGTCAGCACTCATGTTGTGTGCGGGCAATAGGAAAATTTTCCGAAAGGACGAGAGGGGTATAGTGAGTGCAGTTCAACTGTTGGATCCTTCAATACAGAATTTGGATAAGAAATACCCTGTTTCTCTGCTGACCTCGCTTGTGCATTCAAAGAAATGCAGGAAACAGATGGTAGCGGCTGGTGCTTGTGTACATACACAAAAACTTGTTGAGATGGATGTTGAGGGGGCTAAGAAACTCTTGGATAGTCTTGGTAGTGGAAAGATATGGGGAGTTTTTGCAAGACCCTAG 1656 0.4686 MKVSETDPVNLCIQLLSSLLEEIPTVLNFKGKWSLIRAKLTDLQTQLNDFSSEFPNYSSHSLSLELLQSISHTLSDAVSLAKDCQSPNLSQGKLKTQSDIDSVLAKLDRHVKDCEILIRSGVLQDGAVSSSSKREAVRSESRNFITRLQIGSAESRKSAMDSLLGLLEEDDKNVVIAVAQGVVPVLVRLLDSASSEMKEKTVAAISRVSMVDSSKHVLVAEGLLLLNQLVRVLDSGSGFAKQKACIALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSVLPEIRENFVEEDTVVVLLGLASSGTALAQENAIGCLSNLISEDESLKLLFVKEGGIECLKNFWDSAPAVQSLEVAVDLLKHLASSAPVAEVLVSDGIIPRLMGVLNCGILGVRTAAARAVYALGFSSTKTRKEMGECGCTTPLIKMLDGKAVEEKEAAAKALSALMLCAGNRKIFRKDERGIVSAVQLLDPSIQNLDKKYPVSLLTSLVHSKKCRKQMVAAGACVHTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1623 551 Pfam Armadillo/beta-catenin-like repeat 171 206 IPR000225 GO:0005515
Bisa08g1623 551 Gene3D - 96 382 IPR011989 -
Bisa08g1623 551 SUPERFAMILY ARM repeat 144 489 IPR016024 -
Bisa08g1623 551 Gene3D - 383 536 IPR011989 -
Bisa08g1623 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 170 210 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 254 294 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 421 461 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 295 335 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 379 419 IPR000225 GO:0005515
Bisa08g1623 551 SMART arm_5 337 378 IPR000225 GO:0005515
Bisa08g1623 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1623 Bisa-ChrBisa08 37739074 37740729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1623 127 410 U-box Gene Family AT2G23140 26.573 1.32e-16 81.3