Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1622 ATGGATGACGGCAGCCAACATGAAAATGGTAGGCATAAGATGGACTTATACAGAGGAGCACATTCCCCGTGGAGTATGGCTCCTCAACATCAAGTAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATTATGTCCATTATAGCTGAGAGGGAGGCTGCCATTCGAGAACGAAATGCAGCACTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTCTTCAGAGGGATAATGCCCTAATGGAACGGGATAATGCCTTTGCGGCCCTTCAAATCCGGGACAATTTCCCATTGGGTAGTGGAATTCAACGTGGGTCAAAGCGGATGCACCATTCCTCAAACCATGTAGTTGACATGGCAGAAGCTGCATACAGCACAAAGGATATGACTATAACTGAGGCCTTCCCTGTGACTGTTATAGATTCTGAAACTGTTAAATCTCATCAGGCTAAGAGAAAGAAGGAAGACAAAGTAATTTCTTCTAAGGTGTCAAAGCCCGCTGGCAAAGGAAAGAAAGTGGGCGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACAAAAATTAAATCTGAGTGGGAGAGGCAGGATGTTGGCTTGAACTTGGTTACATTTGATGAAGCTACCATGCCAGCTCCAGTTTGCACGTGCACTGGAGTACCGCGGCAGTGCTACAAATGGGGAAATGGTGGATGGCAGTCATCTTGTTGTACCACCACTTTGTCAATGTATCCACTACCACAGCTTCCAAACAAGCGGCATTCCCGAATCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAGGTTAGCAGCAGAAGGCCATGATTTATCTATATCATTGGATCTCAAGGACTATTGGGCCAGACATGGAACAAATCGCTACATCACTATCAAGTAG 939 0.4558 MDDGSQHENGRHKMDLYRGAHSPWSMAPQHQVKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDNALMERDNAFAALQIRDNFPLGSGIQRGSKRMHHSSNHVVDMAEAAYSTKDMTITEAFPVTVIDSETVKSHQAKRKKEDKVISSKVSKPAGKGKKVGEDLNRSASSEGTKIKSEWERQDVGLNLVTFDEATMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRLAAEGHDLSISLDLKDYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1622 312 Coils Coil 59 92 - -
Bisa08g1622 312 PANTHER - 1 312 IPR010409 -
Bisa08g1622 312 MobiDBLite consensus disorder prediction 158 188 - -
Bisa08g1622 312 SMART GAGA_bind_2 1 312 IPR010409 -
Bisa08g1622 312 MobiDBLite consensus disorder prediction 158 197 - -
Bisa08g1622 312 Pfam GAGA binding protein-like family 1 312 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1622 Bisa-ChrBisa08 37713979 37715038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1622 1 312 BBR or BPC Transcription factor family AT2G21240 60.828 2.81e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bisa08g1622 GAGA_bind 7.3e-102 No_clan