Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1621 ATGGGTTGCGTTCTCGGAACGCCGGCGGATAGAGTAGGACGCCGGTCGGATTCCGGAGCTCAGCACCGTGGCCGCGGTAGCCAGAGACAATCTGTCACTGACGGAGGTAATGCCGTTGTGGTTAGGAAGGAAGGGGCGGCGAGGGAGAAGCAGAAGCATGAGACTCGGCACACCGGCGATTTCCCCGGGACTGTTCCGGTGCCGGAGAGACGGAAGCCTAGGATTGATCCGTACGCTAAGACCGAACAGGGTTGGCCGTCGTGGTTGATGGCAGTGGCCGGCGACGCAATCCGAGATTGGTCTCCTCGTCGCGCCAACACGTTTGAGAAGCTTGCTAAGATTGGGCAAGGGACTTACAGCAATGTATATAAAGCTAGAGACCTTCTTACTGGGAAGATAGTGGCTTTAAAGAAAGTTAGGTTTGATAATCTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTATTCTGAGGCGGCTTGATCACCCCAATGTCTTAAAGCTTGAAGGCTTGGTAACTTCAAGAATGTCATGTAGTCTTTACTTAGTATTCGAGTATATGGAACACGATCTTTCAGGGCTTACAGCTCGCCAAGGTGTTAAGTTTACTGAGCCTCAGGTCAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCCTAGGTGTCTTGCACCGTGATATTAAGGGTTCCAATCTGCTCATTGACAACGAGGGAATCCTTAAAATTGCAGATTTTGGACTAGCAACTTTCTATGATCCCAGGCAAAAGCAGCCCATGACAAGTAGAGTTGTCACCCTTTGGTACCGCCCCCCTGAGCTTCTTCTTGGGGCTACACTCTATGGAGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTTAAATTATGTGGCTCCCCATCTGAGGAATATTGGAAGAAGTATAGATTGCCAAATGCTACACTCTTCAAGCCGCAGCAGCCTTATAAACGTTGCCTTTCAGAAACCTTCAAGGATTTTCCTCCTTCTTCATTACCTCTAATTGAAACTCTTCTCGCAATAGATCCAGATGATCGTGGCACTGCCCCAGCTGCTCTATGTAGTGAATTCTTTGCCACTGAGCCCTATGCTTGTGAACCATCAAGCTTGCCGAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAGCTCTAAGTGGGAAAGCTAATGCAGTTGATGGTGCCAGAAAAGTGAAAATACGTGATCGTGGTCGGGCCATTCCGGCTCCAGATGCCAATGCAGAGATGCCAACAAACATAGATAAGTGGAGAGTTGTGACCCATGCAAATGCGAAAAGCAAAAGTGAGAAATTTCCGCCTCCTCATCAGGATGGTGCTGTTGGATATCCATTGGATGCATCCCATAAAGGACTTGTTTCATTTGGTGCCACTGATGCTTCCTTTGGCTCAGCAATATTTAATTCAAGAGCAGGATCTATTAGAAATCATGCTGCTGCAAGACCTTACAGAGGGAGGAAAACTAATAAAGCAGACTCCCAGATGGCTTCATCATGGAAATTTATGCGAGCCTTCAAGCCATCGTCAATAGGCCCATCTATGAACTTATTATTTAGGAGCAATTGA 1713 0.4764 MGCVLGTPADRVGRRSDSGAQHRGRGSQRQSVTDGGNAVVVRKEGAAREKQKHETRHTGDFPGTVPVPERRKPRIDPYAKTEQGWPSWLMAVAGDAIRDWSPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLSGLTARQGVKFTEPQVKCYMKQLLSGLEHCHSLGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPRQKQPMTSRVVTLWYRPPELLLGATLYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCLSETFKDFPPSSLPLIETLLAIDPDDRGTAPAALCSEFFATEPYACEPSSLPKYPPSKELDVKLRDEEARRQKALSGKANAVDGARKVKIRDRGRAIPAPDANAEMPTNIDKWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASHKGLVSFGATDASFGSAIFNSRAGSIRNHAAARPYRGRKTNKADSQMASSWKFMRAFKPSSIGPSMNLLFRSN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1621 570 Gene3D Transferase(Phosphotransferase) domain 1 191 432 - -
Bisa08g1621 570 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1621 570 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1621 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Bisa08g1621 570 FunFam probable serine/threonine-protein kinase At1g54610 95 190 - -
Bisa08g1621 570 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Bisa08g1621 570 PANTHER CELL DIVISION PROTEIN KINASE 106 396 - -
Bisa08g1621 570 Gene3D Phosphorylase Kinase; domain 1 94 190 - -
Bisa08g1621 570 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1621 570 MobiDBLite consensus disorder prediction 1 72 - -
Bisa08g1621 570 CDD STKc_CDK9_like 108 392 - -
Bisa08g1621 570 SUPERFAMILY Protein kinase-like (PK-like) 102 397 IPR011009 -
Bisa08g1621 570 MobiDBLite consensus disorder prediction 43 59 - -
Bisa08g1621 570 FunFam probable serine/threonine-protein kinase At1g54610 191 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1621 Bisa-ChrBisa08 37705688 37709487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1621 100 462 Core Cell Cycle Gene Families AT5G10270 48.969 8.73e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa08g1621 Pkinase 3.9e-67 CL0016