Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1594 ATGGATTGGAATATGAAAGCATCTTCTTGGGATTTGAGTGAATTAGACCAAGAAGCAGCCATGCCCACCGTAGGAACAGTTGAAGGGTCAAGCAGATTTGGAGTTGACAGAAGCAGAGGCGAATTTTCTGTGGATTTGAAGCTGGGTCAAGTGGGGAATTCTAGCAATGAGCCAGCAGTGGCCAAGTGGAAAGACGTTGGAGGAGGGATCTCCAAAGTGGCTTCTTCTTCTTCTTCTTCTTCACCTTCTTCAGGATCATCCAAGAGAGCTCGAGCCATCAACAATGGAACCCAGACAGTGTCATGCCTTGTGGATGGGTGCAATGCGGATCTTAGCCATTGCAGGGACTACCATAGACGCCATAAGGTCTGTGAACTCCATTCCAAGACTCCGGTGGTCACCATTGGTGGCAACAAGCAAAGGTTCTGTCAACAGTGTAGCAGGTTCCATTCTCTGGAGGAATTTGATGAAGGAAAGAGAAGCTGCAGGAAGCGTTTAGACGGGCACAACCGACGGAGGAGAAAGCCGCAGCCAGATGCTCTTGCGAGATCTGGTACCTTTTTGTCCAATTACCAAGGGTCCCAGGTGTTATCCTTCTCAAGCTCGCATATGTATTCTGCCAATGCTATGGCTCACCCTGCTTGGAATGGAGCAGTCACATCGTGTGCAGAAGGTAGGCTTCCCAGTCACCACCATCCCCAACCCCAACAGATGCATAATCTTGTTGACAAACAGAACTTGTTTCTGGGGTCTTCTTCCACCTATAAAGAAGGTAATAAGCAGCAACACTTGGCTTTCTTGCAAGCTGACAACTCCACAACGATGGAAAACAACAACAACAACAACAACAACCAGAGTAATACAGCTCTGGCACCACCACCACCACCACCACCACGACAACCAGTTGTTTCTGTGTGTCAGACGTTTCTGAGGACCACCACGCCTTTGTCATCTCCACTTCATGACCACGACTCTCATTGTGCTCTCTCTCTTCTGTCATCGCCACATGCGCACACAAGTGGGAGTGGTTTGGGCCAGATGGTGCAGCCTCCTCATCACGCCATGACCTTCATGCACCACCACCAATCCCTGGGACTCAGCCTGCACGACCATAACATGGAGCCTGTGGACCCGGTCCTGGTTCACAGTGAAAGCGACCACTGTCCGGCTATGTATAACATGAATGAAGCCCCTCAACCATTTCCTTTTCATTGGGAATAG 1221 0.4971 MDWNMKASSWDLSELDQEAAMPTVGTVEGSSRFGVDRSRGEFSVDLKLGQVGNSSNEPAVAKWKDVGGGISKVASSSSSSSPSSGSSKRARAINNGTQTVSCLVDGCNADLSHCRDYHRRHKVCELHSKTPVVTIGGNKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPDALARSGTFLSNYQGSQVLSFSSSHMYSANAMAHPAWNGAVTSCAEGRLPSHHHPQPQQMHNLVDKQNLFLGSSSTYKEGNKQQHLAFLQADNSTTMENNNNNNNNQSNTALAPPPPPPPRQPVVSVCQTFLRTTTPLSSPLHDHDSHCALSLLSSPHAHTSGSGLGQMVQPPHHAMTFMHHHQSLGLSLHDHNMEPVDPVLVHSESDHCPAMYNMNEAPQPFPFHWE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1594 406 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 388 IPR044817 GO:0003677
Bisa08g1594 406 MobiDBLite consensus disorder prediction 71 92 - -
Bisa08g1594 406 SUPERFAMILY SBT domain 100 181 IPR036893 GO:0003677|GO:0005634
Bisa08g1594 406 ProSiteProfiles Zinc finger SBP-type profile. 99 176 IPR004333 GO:0003677
Bisa08g1594 406 MobiDBLite consensus disorder prediction 273 300 - -
Bisa08g1594 406 FunFam Squamosa promoter-binding-like protein 14 93 163 - -
Bisa08g1594 406 MobiDBLite consensus disorder prediction 273 288 - -
Bisa08g1594 406 Pfam SBP domain 102 175 IPR004333 GO:0003677
Bisa08g1594 406 Gene3D - 93 163 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1594 Bisa-ChrBisa08 36999481 37002159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1594 1 223 SBP-box Gene Family AT5G50670 51.271 2.89e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa08g1594 SBP 5.3e-31 No_clan