Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1588 ATGGAATGTAATAAAGATGATGCCATAAGGGCTAAGGAGCTTGCAGAGAAGAAGATTTTAAAGATGAACATTGCTGGCGCGAAAAGATTTGCCTTGAAGGCTCAAGACTTGTATCCGGGTCTTGATGGACTTCCTCAACTGTTAGCAACTCTTGAGGTGTATGCCTCTGCTGAGAAAAGAATAAATGGAGAAGTTGACTGGTACAAGGTCCTTGGTGTAGAACCCTTTGCTGATGACGAAACAATTCGAAGGCAATATAGGAAACTTGCTATTGCTCTACACCCTGATAAAAACAAATCAGTAGGTTCAGAAGGGGCATTTAAACTCATCTTTCAGGCGTGGAGTTTACTTTCTGATAAAGCCATGAGAAGCTTTTATGACCAAAACCGCAATTTAAGGAGTTTATATGAAGTTTCACTTGGGAAGCCTCCTGTACCAGCAAGCCAGAATCATTTCTTTAATTTTTTCAATACTGCAAACTGGAAGGATCGAGACCATAGAACTGCTGCTTGTCCTGTACCTACTCCAACATCTCCTGTGTCATTGAAACAGTCATTCTGGACTCTATGCAATGCTTGTAGGACACAGTTTGAGTACCCTACAGTTTATCTAAACTGCAAACTTATCTGCAACCGCTGTCATAAGCCCTTTTTGGCCTTAGAGACACCACCTCCAGCTAATTACTGCAATGCTGCATGTGCTCACACACACAAAAGGAAATTTGAATCAACCAGAATGGAAGCAAACGGTAATATTTCCAATATTACACCAACTTCTTCTATGAACTCAATGAAAAATATATTTGGCTCCAACACTTTCTTTATGCCTAATGGTATTTCCAATGTCCCAAAATCCGCTTCTACTGCTGCTAAAGCTCCTGGTGTTTTTGGGGTGTCATCTGAGCATTTCAAGAGAGGGCATGGAGACACACCACCTCCCACCGCGAGGGGAGAAGTCCGTTTCAGGAAAACTCATGCTACTAAGACATATGCTTCTGTTTATGCTTTTCCATCCTCTTGTGTTGGTTCCAATCCGGTCATGAAAGAAGATAGGCCAAGGCAAAAAAGGATCATCAATAAATGCAGAGTTAATAGTGATAGAAGACATGTGGAAGCCAAAATGGCATCTCAAACCAAAGGAATAAAGTCTGCTAGTGAATATGGATCTCAGAAGGGTGGTATTGAGATAGAAAGTGCTAATGCTTCTAGAAACAACAAACGGAATGGTATGACGGATGCACTGCAGAAGCAACTAAAGATCTTCTTGATGGAAAAAGCTAAAAATGATATTCGTATGAAGCTTAATGAAGGGAATAGTTGTTCTGTATCAAAGAATCTGGACGAGCCAAACAAACCTGATAAGGAAATCAAGAAGAAGGACAACGAAAGGGCTAGAAATGGTATAAAACATGGTGGAGAAGAATTCCAAGAATTTATTGATTCTGAGACCAAGGCCAAAAAATCTTCCTCTGCTGATATTTCTACTATGGAGGTGGATGGTTCCTCCATGAGTGTTCCAGACTCGGACTTCCATGATTTCGACAATAACCGAACAGAGAAATCATTTGGTGAGAACCAGGTATGGGCTGCTTATGATGACGATGATGGCATGCCGCGTTACTATGCTATGATTCATAGTGTGATATCCTTAAAACCATTCAAAATGAGAATGAGTTGGCTTAACTCTAAAAGCAATGATGAACTAGCCCCGATAAAGTGGGCTGAGTATGGCTTTCCAAAGACTGCCGGTGTCTTCCGAGTTGGCAAATATGAGCTTAATGGCTCTCTTAATTCCTTCTCACACAGGATTAAGTGGACCAAAGGTGCTAGAAGGGTTGTACACATATATCCTAAGAAGGGCGATGTTTGGGCTCTATATCAAAACTGGTCTCTTGACTGGAATGAACTCACTCCAGATGAAACAGTACAAAAATACGATATGGTGGAAGTGCTTGAAGATTACAACGAGGTCGAAGGTGTGACTGTTGCACCACTTGTTAAAGTTGCTGGTTTCAAGACGGTTTTCCGCCGTCAAGCAGATAAAAGGAAGATCAAGAACATTCCCAGGGAGGAGATGTTTCGCTTCTCACACGAGGTACCTTCCTACTTGCTTACCGGTCAAGAAGGTGATAATGCGCCTCGAGGTTGCTTGGAGCTTGATCCTGCTGCCATACCTTTGGAACTTCTTCAGGTGGTAATGGAAGATCCAGAGCAAGAGACAGTAACGACAAAGAGAGAAGATTCTGTACAAGATATTCCAAGAAAGGTGGTAGCTGAAACAATGGAAAGGAAGGATAATAGGCCTGAGAATTTGATTGTATATACCCGAAAGCGATTCAGGGAGAAGAAAGCGTCTGAAGTAGCAAGTAATTGCTAA 2376 0.4171 MECNKDDAIRAKELAEKKILKMNIAGAKRFALKAQDLYPGLDGLPQLLATLEVYASAEKRINGEVDWYKVLGVEPFADDETIRRQYRKLAIALHPDKNKSVGSEGAFKLIFQAWSLLSDKAMRSFYDQNRNLRSLYEVSLGKPPVPASQNHFFNFFNTANWKDRDHRTAACPVPTPTSPVSLKQSFWTLCNACRTQFEYPTVYLNCKLICNRCHKPFLALETPPPANYCNAACAHTHKRKFESTRMEANGNISNITPTSSMNSMKNIFGSNTFFMPNGISNVPKSASTAAKAPGVFGVSSEHFKRGHGDTPPPTARGEVRFRKTHATKTYASVYAFPSSCVGSNPVMKEDRPRQKRIINKCRVNSDRRHVEAKMASQTKGIKSASEYGSQKGGIEIESANASRNNKRNGMTDALQKQLKIFLMEKAKNDIRMKLNEGNSCSVSKNLDEPNKPDKEIKKKDNERARNGIKHGGEEFQEFIDSETKAKKSSSADISTMEVDGSSMSVPDSDFHDFDNNRTEKSFGENQVWAAYDDDDGMPRYYAMIHSVISLKPFKMRMSWLNSKSNDELAPIKWAEYGFPKTAGVFRVGKYELNGSLNSFSHRIKWTKGARRVVHIYPKKGDVWALYQNWSLDWNELTPDETVQKYDMVEVLEDYNEVEGVTVAPLVKVAGFKTVFRRQADKRKIKNIPREEMFRFSHEVPSYLLTGQEGDNAPRGCLELDPAAIPLELLQVVMEDPEQETVTTKREDSVQDIPRKVVAETMERKDNRPENLIVYTRKRFREKKASEVASNC 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1588 791 PANTHER BNAC03G44070D PROTEIN 1 725 - -
Bisa08g1588 791 MobiDBLite consensus disorder prediction 488 502 - -
Bisa08g1588 791 MobiDBLite consensus disorder prediction 439 465 - -
Bisa08g1588 791 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Bisa08g1588 791 MobiDBLite consensus disorder prediction 480 507 - -
Bisa08g1588 791 PRINTS DnaJ domain signature 102 122 IPR001623 -
Bisa08g1588 791 PRINTS DnaJ domain signature 86 101 IPR001623 -
Bisa08g1588 791 PRINTS DnaJ domain signature 68 86 IPR001623 -
Bisa08g1588 791 MobiDBLite consensus disorder prediction 447 465 - -
Bisa08g1588 791 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Bisa08g1588 791 Gene3D DnaJ domain 53 139 IPR036869 -
Bisa08g1588 791 Pfam DnaJ domain 66 127 IPR001623 -
Bisa08g1588 791 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Bisa08g1588 791 SMART dnaj_3 65 122 IPR001623 -
Bisa08g1588 791 MobiDBLite consensus disorder prediction 368 388 - -
Bisa08g1588 791 CDD DnaJ 66 119 IPR001623 -
Bisa08g1588 791 Pfam Domain of unknown function (DUF3444) 502 708 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1588 Bisa-ChrBisa08 36731760 36734135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1588 4 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.870 5.79e-26 108