Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1585 ATGATCTCCGCCGAAGCCCCCATCTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGATCCTGGCTCCACGCCGAGGAGAACAAGAGGCGAACGCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACTGATATCTTCGATTTCTTGGTTGATATTGTGCCCAGGGACGAGATCAAGGACGAGGCTGCCCTGGGTGGAATGGTGGGGACCGCCGCCAGCGGGGTCCCTTACTACTATCCGCCAATGGGGCAGACTGCTGGCCCTCCCGGTGGCATGATTATTGGGCTGCCGGCGGTGGATCCCGCCGGAGTGTACGTGCAACCGCCTTCGCAGGCGTGGCAGTCGGTGTGGCAGACGGCGGCGGATGATGGGTCATACGGCAGCGGCGGGAGCAGTGGACAAGGCAATCTTGATGGTCAGAGCAACACCTTGAATCTGCTGTGCCGCACTAGGAAGTTTGATTTCATGTCTGTGACTAGGGTGGCTTATGCAATTTCTGCCTTTCCAGCATGTTTGTTTGTTTCTTACAAATGTGCAACTGCAATAGTCATATTAGGGTTGTTTTGCATTGAAAGCAAAATGGATAAGATTGACGGATTAATGGTGATGATGCAATGGTTTGAGGTTGCAAAGATGTTGGACTTGCGCAAAGATGCTTGGAAATTTCCATTGCTTGTGATTTAG 702 0.5385 MISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMVGTAASGVPYYYPPMGQTAGPPGGMIIGLPAVDPAGVYVQPPSQAWQSVWQTAADDGSYGSGGSSGQGNLDGQSNTLNLLCRTRKFDFMSVTRVAYAISAFPACLFVSYKCATAIVILGLFCIESKMDKIDGLMVMMQWFEVAKMLDLRKDAWKFPLLVI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1585 233 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 79 - -
Bisa08g1585 233 Pfam Core histone H2A/H2B/H3/H4 1 46 IPR007125 GO:0003677
Bisa08g1585 233 Gene3D Histone, subunit A 1 61 IPR009072 GO:0046982
Bisa08g1585 233 SUPERFAMILY Histone-fold 1 61 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1585 Bisa-ChrBisa08 36701685 36706026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1585 1 146 CCAAT-HAP5 Transcription Factor Family AT3G48590 87.500 1.12e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa08g1585 Histone 2.2e-09 CL0012