Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1573 ATGCCTCTTTTAAAAAGAAGGCCTTTTGCCTTGGCTGTACCACCTAAGGACTTGGAGCCCCATGAGACTGTTTACCAAATTCGATTTACAAAAGAAATATTCCGAGATTATCATGATTATTTGAACCGCATAAATTTATATCGCCAGAGAGTTTGGATGTGTAAAGTCACTGGGAAAACTAGCTTGACTTATGAAGAGGCTATGGTGTCAGAAAGACGTGCCACTGAAAAGGTTCAACAGATCCCCAAAGAATTCATGGCTCCTGCACTAAGGATTATTCAGTACAGCCAGCTCCCTTTGAGGGATCTTGCTGAGACAATAGCTGAAAAGTTGCAGGAGCAGTTGTATGTGGGTGCTGAACTGCAAGGAAAAAAGGATGATGGAGTACATCCCTGCAAAGTATTGAAAGCCATACAGGGTGGAGCTGACAAAGACCGATATGAGGTAGCTTGGCTTGACAAAAACAAGAATACAATTGAAGAAACAGAAGTCTCTGCCAAAGATTTGGTGCCGAAGAAGCTTCCTTTCAGCAGAAACATTTTGAAATCTTTTATCAGGGAATCTACATACCGTAATGCTCCTTGGGTAATACATGATGAATTGGCCCAAAATTATGGAATCTCAATTGATATCCCAGAGGAGTTAAGAGGAAGAGCTTTCTTCAAAAATGGACTTTTAATCTGCAACAAGAAAAGGAAAAATGAGGAATCAAATGGAGAAACTGAAAATTGTAAAAGGAAGAAGTCGGAGCAGGCAAAAATCAGTGGTTCCACTTTGAAAGAAAATGATCATTGTAAGGAAGAAGTGATCAAATATCCAATTGATGATCTATTGGTGAAGCCTAATCCAAATGATCCTGATTTCACTAAACGTCCTTCTCCTTCAAGAGACTTCAATGTTCCAATTCATTGTGTAGGGGATCTCTTGATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCTCCCTACTCTTTAGAAGATTTTGAAAATGCAATTTGCCACAAGGAAAGCAATGTGGTTCTCCTTGTGGAAACTCATGCAGCACTCTTTCGGGTGCTCATGAAAGAAGATGGTGATTACACTTCAGCTTTAGATAAAAGAAAGCGGAAGTTTAAGATTACAATGGTTAATTGGCATGAATATTTATGCGACTTTCTAGAAATGATCAATGTTCCTGGATTACGGCACTATGAAGCTACCATAAAAAGAGGACATTATGGCCTTGTGGATGTTGATGCTAAACTAGAAATTTTACATGAATTGGTCAATCGAATCCTTGAAACTTCAATTTTCAGGGAAAAGTTGGATGATGTTATTGAACAGCGACAGGCGCTTGGAGTTACTAGAAGGGGAGAAGCTCTGGAAGATGCTAGGAAGAGAAGAGAAGAAAAGGAGCGGTTGAAAGCTGAGTTTGACAGCAATGGGAGTATGAATGGGCACTGTCAACAAAATGGGACAAGTGTCTTAAAAAATAATCACAGTGGACAGAATGGAGATGTAGGAAAGAATAGAAATGGAGAGAAAGAATCATCTGGGCAAAGGGATGCTTTGGAAGGAAGTGTGATCAAACATTCAAAACGTGCATCAAAAAAGACACTTAAGAAGCAGAGTGTAGAACTGAAAGAACCAGCAGAAAATGGAAAGGAATCACAGAAGCAATTAAAGGGCGAGAAGGACCGACCAGAGAAGAATAGTATAGAACAGAGGAGAGAATATTTTGAACGGGAGATGGAGAAACGATTTATACGTACAAGCCCCTTAGGTAAAGACAGGCATTACAACAGATATTGGTGGTTCCGCCGTGATGGGAGGATATTTGTAGAAAATTCTGATTCTAAGGATTGGGGCTACTACAGCAGCAAGGAAGAGCTTGATGCATTGATGAGCTCTCTGAATTGTAAGGGTGAGCGGGAAAGAGTGCTGCAAAAACAACTGGAAAAATATTATAGTAGAATATGTTTGGAACTTCAGAAAAGATCAAAAGATTTGATACAGAAGATTGCACTGGATGAGTCTGTGCTCCGGAGATCTACTCGAGTTCGAGCACCCCCAAGGGAAAATCCTGCAAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGAAGAGTAG 2121 0.4003 MPLLKRRPFALAVPPKDLEPHETVYQIRFTKEIFRDYHDYLNRINLYRQRVWMCKVTGKTSLTYEEAMVSERRATEKVQQIPKEFMAPALRIIQYSQLPLRDLAETIAEKLQEQLYVGAELQGKKDDGVHPCKVLKAIQGGADKDRYEVAWLDKNKNTIEETEVSAKDLVPKKLPFSRNILKSFIRESTYRNAPWVIHDELAQNYGISIDIPEELRGRAFFKNGLLICNKKRKNEESNGETENCKRKKSEQAKISGSTLKENDHCKEEVIKYPIDDLLVKPNPNDPDFTKRPSPSRDFNVPIHCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENAICHKESNVVLLVETHAALFRVLMKEDGDYTSALDKRKRKFKITMVNWHEYLCDFLEMINVPGLRHYEATIKRGHYGLVDVDAKLEILHELVNRILETSIFREKLDDVIEQRQALGVTRRGEALEDARKRREEKERLKAEFDSNGSMNGHCQQNGTSVLKNNHSGQNGDVGKNRNGEKESSGQRDALEGSVIKHSKRASKKTLKKQSVELKEPAENGKESQKQLKGEKDRPEKNSIEQRREYFEREMEKRFIRTSPLGKDRHYNRYWWFRRDGRIFVENSDSKDWGYYSSKEELDALMSSLNCKGERERVLQKQLEKYYSRICLELQKRSKDLIQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1573 706 Pfam DDT domain 303 359 IPR018501 -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 479 505 - -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 453 574 - -
Bisa08g1573 706 ProSiteProfiles DDT domain profile. 302 363 IPR018501 -
Bisa08g1573 706 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 23 120 IPR013136 -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 506 529 - -
Bisa08g1573 706 SMART testlast3 302 363 IPR018501 -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 453 475 - -
Bisa08g1573 706 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 586 652 IPR028941 -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 237 259 - -
Bisa08g1573 706 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 704 - -
Bisa08g1573 706 MobiDBLite consensus disorder prediction 536 574 - -
Bisa08g1573 706 Coils Coil 454 478 - -
Bisa08g1573 706 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1573 408 651 Homeobox Transcription Factor Family AT5G44180 27.451 7.11e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bisa08g1573 WAC_Acf1_DNA_bd 6.6e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1573 08 35744210 35749786 Bisa08g1573 08 35744210 35749786 ECH