Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1555 ATGGCCGCAGAAATTTGCTGTGGTTCTCTGCGCTTATCCTGTGAAACTCAGTTGCACCATCAACAACGGCATGTTCGACGACGAACCAGAACTTCAAGAGCAACTAGCAGATTGCAGTTTTCATTACCGTTCTCACTTCCTCCACTCGAAGCTTCCTTCTCTTCTTGTCCCTCCAAAAATGGCTGCTCCTCCAGAACCTTCCGCGCCAATAGGTTCAGAGTGTTCTGCCAGGTTGCTGGCCTCTACGACCTCGGATTCGCCGCCAAAGTTGGCCAGGACCGTCTCTCTAAGGTCCCTGTCTCTAATATAAGGAATTTCTCAATCATTGCTCATATTGACCATGGGAAGTCAACCTTAGCTGATAAGTTGCTTCAAGTGACTGGTACTGTTCAGCAGAGAGAAATGAAGGATCAGTTTCTGGATAACATGGATTTAGAGAGAGAAAGAGGCATCACAATTAAGCTACAGGCAGCTCGAATGCGTTATGTGTTTGAAAATGAACCATATTGCTTGAATCTGATTGATACTCCGGGGCATGTTGACTTCTCTTATGAGGTGTCTCGATCACTTGCTGCGTGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGAGTTGAAGCACAAACACTGGCTAATGTTTATTTGGCCTTGGAGAATAACCTTGAAGTTATTCCTGTTTTGAACAAAATAGATCTTCCAGGTGCAGAACCAGATCGAGTTATTAAAGAGATTGAAGAGATTATTGGGTTAGATTGTAGCAATGCAATTCTCTGCTCTGCAAAGGAAGGAATTGGTATAACTGATATTCTCAGTGCCATTGTTGCAAGAATTCCACCACCTGCTGATACAATTGAAAGGCCATTAAGGGCTCTAATTTTTGATAGTTACTATGATCCATATAGGGGTGTCATTGTATATTTTCGAGTTGTAGATGGGTCCATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGAGAAGGACTATTTTGCTGATGAAATAGGAGTTTTGTCTCCCAATCAACTCCAAGTTGAAGAATTGTATGCGGGTGAGGTGGGCTATCTTTCAGCATCTATAAGAACTGTAGCTGATGCCAGGGTGGGTGACACTATAACTCACTATGGCAGAAAAGCAGAGATCTCACTCCCTGGTTACGAGGAAGCCACTCCGATGGTGTTTTGTGGCCTATTTCCTGTTGATGCAGACCAATTTCCTGAGCTACGTGATGCACTTGAGAAGCTACAGCTCAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCAAGTGCCATGGGGTTTGGCTTTAGATGTGGATTTCTTGGACTTCTCCATATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACAATCTGAGTCTGATAACAACTGCTCCAAGTGTCGTGTATAGAGTGAACGGTGTAAATGGTGATACTGTTGAATGCTCAAACCCATCTTTACTCCCTGAACCTGGAAAAAGGAAGTCAATTGAAGAGCCATTTGTTAAGATCGAGATGCTTACACCAAAGGATTACATTGGACCACTTATGGAACTGGCACAAGACAGAAGAGGGCAATTTAAGGAAATGAAATTTATCACTGAAAATAGAGCATCAATCAACTATGAGTTACCACTGGCAGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGCTATGCTAGCATGGAGTATACTTTCATCGGGTACATAGAAAGTGATTTAATTAAACTTGACATACAGATTAATGGTGATCCAGTGGAACCATTGTCTACAATTGTTCACAAAGATAAGGCATACTCAGTAGGAAGAGCTTTGACTCAAAAGTTGAAAGAGCTCATACCACGTCAAATGTTTAAAGTGCCTATTCAGGCGTGCATAGGTTCGAAAGTGATTGCAAGTGAAACTTTATCTGCAATAAGAAAGGATGTATTAGCGAAATGCTATGGTGGGGACATTTCAAGAAAAAAGAAATTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAAGCAATTGGTAAAGTTGACGTGCCTCAAGAAGCCTTCATGGCGGTTTTGAAACTTGAAAAGGAGGTGATATGA 2097 0.4192 MAAEICCGSLRLSCETQLHHQQRHVRRRTRTSRATSRLQFSLPFSLPPLEASFSSCPSKNGCSSRTFRANRFRVFCQVAGLYDLGFAAKVGQDRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEVIPVLNKIDLPGAEPDRVIKEIEEIIGLDCSNAILCSAKEGIGITDILSAIVARIPPPADTIERPLRALIFDSYYDPYRGVIVYFRVVDGSIKKGDRVYFMASEKDYFADEIGVLSPNQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRKAEISLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNGVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGPLMELAQDRRGQFKEMKFITENRASINYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYIESDLIKLDIQINGDPVEPLSTIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASETLSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1555 698 FunFam Translation factor GUF1, mitochondrial 384 465 - -
Bisa08g1555 698 Pfam Elongation factor Tu domain 2 303 373 IPR004161 GO:0005525
Bisa08g1555 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 299 IPR027417 -
Bisa08g1555 698 Gene3D - 100 283 IPR027417 -
Bisa08g1555 698 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 95 695 IPR027518 -
Bisa08g1555 698 NCBIfam translation elongation factor 4 102 693 IPR006297 GO:0005525
Bisa08g1555 698 CDD EF4_II 289 374 - -
Bisa08g1555 698 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 141 156 IPR031157 -
Bisa08g1555 698 Gene3D Elongation Factor G (Translational Gtpase), domain 3 384 465 - -
Bisa08g1555 698 CDD EF4_III 391 466 - -
Bisa08g1555 698 Pfam GTP-binding protein LepA C-terminus 586 692 IPR013842 -
Bisa08g1555 698 SUPERFAMILY EF-G C-terminal domain-like 390 468 IPR035647 -
Bisa08g1555 698 CDD lepA_C 499 578 IPR035654 -
Bisa08g1555 698 CDD LepA 104 281 - -
Bisa08g1555 698 Pfam Elongation factor G C-terminus 497 581 IPR000640 -
Bisa08g1555 698 Hamap Elongation factor 4 [lepA]. 98 696 IPR006297 GO:0005525
Bisa08g1555 698 PANTHER TRANSLATION FACTOR GUF1-RELATED 87 693 IPR006297 GO:0005525
Bisa08g1555 698 FunFam Translation factor GUF1, mitochondrial 284 383 - -
Bisa08g1555 698 Gene3D Translation factors 284 382 - -
Bisa08g1555 698 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 101 282 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 NCBIfam small GTP-binding protein domain 104 271 IPR005225 GO:0005525
Bisa08g1555 698 FunFam Elongation factor 4 100 283 - -
Bisa08g1555 698 Gene3D - 466 576 - -
Bisa08g1555 698 SUPERFAMILY EF-G C-terminal domain-like 497 591 IPR035647 -
Bisa08g1555 698 Gene3D - 578 652 IPR038363 -
Bisa08g1555 698 SMART EFG_C_a 496 584 IPR000640 -
Bisa08g1555 698 SUPERFAMILY Translation proteins 263 386 IPR009000 -
Bisa08g1555 698 FunFam Translation factor GUF1, mitochondrial 466 576 - -
Bisa08g1555 698 FunFam Translation factor GUF1, mitochondrial 578 652 - -
Bisa08g1555 698 Pfam Elongation factor Tu GTP binding domain 102 279 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 PRINTS GTP-binding elongation factor signature 224 233 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 PRINTS GTP-binding elongation factor signature 172 182 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 PRINTS GTP-binding elongation factor signature 188 199 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 PRINTS GTP-binding elongation factor signature 105 118 IPR000795 GO:0003924|GO:0005525
Bisa08g1555 698 PRINTS GTP-binding elongation factor signature 148 156 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1555 Bisa-ChrBisa08 34054017 34071669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1555 103 336 Eukaryotic Initiation Factors Gene Family AT3G22980 32.389 2.02e-24 107