LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa08g1549	ATGGCGTCCCCTCCGGTGAATGGTTTACCCATAGCGTACCAAGCATGGACGAGTTTGGCAGTACCAGATTGGCTGAACAAAGGGGACAACGCGTGGCAGATGATTTCAGCGACACTTGTGGGAATCCAGGGCATGCCGGGCCTGGTGATCCTGTACGGCAGCATCGTGAAGAAGAAATGGGCCGTGAACTCGGCCTTCATGGCCCTATACGCCTTCGCCGCAGTCAGCATATGTTGGGCCACGTGGGCCTACAAGATGTCCTTCGGCGAGCGCCTCTTGCCCTTCTGGGGCAAAGCTGGGCCGGCGTTGGGCCAGAATTTCCTGATCGGGCAGGCGGCGCTGCCAGAGACGGCGCACTACTATAAGAGAGGGGAGGTGGAGACGGCGGCGGTGGAGCCGTACTATCCGATGGCGACAATGGTGTGGTTCCAGGGGGTGTTCGCGGCGATCGCGGTGGTGCTCCTGGCGGGATCGGTGCTGGCGAGGATGAACTTCAAGGCGTGGATGATGTTCGTGCCGATGTGGCTGACGCTGTCGTACACGGTGGGGGCGTTCAGCTTGTGGGGCGGTGGGTTCTTGTTTCACTGGGGGGTTATGGACTACTCTGGGGGTTATGTCATTCATGTCTCTTCCGGGATTGCTGGATTTACCGCTGCTTATTGGGTGGGACCAAGATTGAAGAAAGACAGAGAGAAGTTTCCGCCGAACAACGTGTTGTTGACGCTGGCAGGGGCGGGACTTCTGTGGCTGGGGTGGGCCGGATTCAACGGCGGAGATCCCTACTCCGCCAACATTGACTCCTCCATCGCCGTCCTCAACACCAACATCTGTGCCGCCACTAGCCTCCTCATCTGGACTTGGCTTGACGTCATATTCTTCAAGAAGCCCTCCGTCATTGGCGCCGTTCAGGGCATGATCACTGGCCTTGTCTGCATCACTCCCGCCGCCGGTCTGGTTCAAGGTTGGGCAGCCATAGTAATGGGAGTCCTCTCCGGCAGCGTGCCATGGTTCAGCATGATGATCCTCGGCAAGAAGCTCAAGCTCTTCCAAATCGTCGACGACACCCTAGCCGTCTTCCACACCCACGCCGTCGCCGGCCTCCTTGGTGGCATCCTCACCGGCATCTTCGCTGAGCCCCGCCTCTGCGCTCTCTTCCTCCCCGTCACCAACTCCCGGGGAGCCATCTACGGCGGCTCCGGCGGGGTCCAGGTCCTCAAGCAGATCGCCGGCGGCCTGTTCGTGGTGGGGTGGAACGTCGTGGTCACGTCTATCATCTGTGTGGTGATCAACCTGGTGGTCCCGCTGAGGATGTCGGAGGAGGAGCTGGTGGTCGGAGACGACGCCGTTCACGGCGAAGAGGCCTATGCGTTGTGGGGTGACGGAGAGAGGCTTAGTATATATTCGGAAGATACCACGCACCATGGAGTTATGGTGGCGGCAAGTGGAGCCACTCAGGCTGTATAG	1464	0.5977	MASPPVNGLPIAYQAWTSLAVPDWLNKGDNAWQMISATLVGIQGMPGLVILYGSIVKKKWAVNSAFMALYAFAAVSICWATWAYKMSFGERLLPFWGKAGPALGQNFLIGQAALPETAHYYKRGEVETAAVEPYYPMATMVWFQGVFAAIAVVLLAGSVLARMNFKAWMMFVPMWLTLSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHVSSGIAGFTAAYWVGPRLKKDREKFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANIDSSIAVLNTNICAATSLLIWTWLDVIFFKKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWFSMMILGKKLKLFQIVDDTLAVFHTHAVAGLLGGILTGIFAEPRLCALFLPVTNSRGAIYGGSGGVQVLKQIAGGLFVVGWNVVVTSIICVVINLVVPLRMSEEELVVGDDAVHGEEAYALWGDGERLSIYSEDTTHHGVMVAASGATQAV	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa08g1549	487	ProSitePatterns	Ammonium transporters signature.	200	225	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Bisa08g1549	487	PRINTS	Rhesus blood group protein signature	363	379	IPR002229	GO:0005886
	Bisa08g1549	487	PRINTS	Rhesus blood group protein signature	239	257	IPR002229	GO:0005886
	Bisa08g1549	487	PRINTS	Rhesus blood group protein signature	144	160	IPR002229	GO:0005886
	Bisa08g1549	487	PRINTS	Rhesus blood group protein signature	270	292	IPR002229	GO:0005886
	Bisa08g1549	487	PRINTS	Rhesus blood group protein signature	325	343	IPR002229	GO:0005886
	Bisa08g1549	487	Gene3D	Ammonium transporter AmtB like domains	12	473	IPR029020	-
	Bisa08g1549	487	PANTHER	AMMONIUM TRANSPORTER MEP2	17	464	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Bisa08g1549	487	FunFam	Ammonium transporter	12	458	-	-
	Bisa08g1549	487	NCBIfam	ammonium transporter	29	455	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Bisa08g1549	487	SUPERFAMILY	Ammonium transporter	24	437	-	-
	Bisa08g1549	487	Pfam	Ammonium Transporter Family	31	455	IPR024041	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa08g1549	Bisa-ChrBisa08	33876442	33880209	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa08g1549	137	474	Inorganic Solute Cotransporters	AT2G38290	70.414	1.16e-167	475

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa08g1549	08	33876442	33880209	Bisa08g1549	08	33876442	33880209	ECH