Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1530 ATGGGAGATGGCAATCGCCCTAACAGCAACAACAGTGGCAATAACAATAAGCCCGAGTGGCTTCAGCAGTACGATCTAATCGGGAAGATTGGTGAAGGTACCTACGGTCTTGTATTTCTCGCGAGAATCAAATCTCCGACGAATCGTGGAAAATCCATCGCCATCAAGAAATTCAAGCAGTCTAAGGACGGTGATGGCGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTTAGGGAGATATCACACGAAAACGTTGTAAAGCTTGTGAATGTACACATCAATCACGCGGACATGTCTCTTTATCTGGCTTTTGACTATGCTGAACATGACCTTTATGAAATCATTAGACATCACAGGGACAAAGTCAACCAATCCATTAATCAATACACTATCAAATCCTTGCTCTGGCAGCTGCTCAATGGACTAAACTATTTGCACAGTAATTGGATTATTCATCGAGATCTGAAGCCATCAAATATATTGGTCATGGGTGAAGGGGAGGAACATGGAATTGTTAAGATTGCGGACTTTGGACTTGCAAGGATATATCAAGCCCCTCTGAAGCCATTATCTGAAAATGGAGTTGTTGTAACCATTTGGTATCGTGCGCCCGAGTTGCTTCTTGGGGCAAAACATTATACAAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTCTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTCAAAGCTACTCCAAATCCTTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAACCTTCCCCATTGGCAGCAGGATGTTCAGCATATTCAAGGGCACAAATATGACAACACTAGCCTTTATAATTTTGTACACATATCGCCAAAAAGTCCTGCATATGATCTCTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGAATAACGGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAGCCACTACCTGGGCGGAATGCACTTGTACCCTGCCAACCTGGAGAGAAATTTGTGAACTATCCCACTCGTCCAGTTGACACAACAACAGATTTTGAAGGGACAACCAACCTGCAACCTTCACAACCGGTTTCATCTGGAAATGCTGTTTCTGGCGGCATGCCAGGTGCTCATGTGTCAAATAGATCTGTCCCTCGGCCAATGAATGTTGGTGGCATGCAAAGAATGCCACCACAGGGATTGCAAGCTTATAATCTCTCATCCCAGGCGGGGATGGGTGGAGGTGGTGGAATGAATCCTGGTGGTATACCAATGCAACGTGGTGTTGGGCCGACCCATCAGCAGCAACAGTTGAGAAGAAAAGACCCCGGAATGGGTATGTACCCTCCTCCCCAGCAGAAATCAAGACGTATATAA 1425 0.4477 MGDGNRPNSNNSGNNNKPEWLQQYDLIGKIGEGTYGLVFLARIKSPTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNQSINQYTIKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNTSLYNFVHISPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQPGEKFVNYPTRPVDTTTDFEGTTNLQPSQPVSSGNAVSGGMPGAHVSNRSVPRPMNVGGMQRMPPQGLQAYNLSSQAGMGGGGGMNPGGIPMQRGVGPTHQQQQLRRKDPGMGMYPPPQQKSRRI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1530 474 PANTHER CELL DIVISION PROTEIN KINASE 22 340 - -
Bisa08g1530 474 MobiDBLite consensus disorder prediction 369 391 - -
Bisa08g1530 474 SMART serkin_6 24 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1530 474 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Bisa08g1530 474 MobiDBLite consensus disorder prediction 429 474 - -
Bisa08g1530 474 Gene3D Transferase(Phosphotransferase) domain 1 107 347 - -
Bisa08g1530 474 Pfam Protein kinase domain 24 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1530 474 ProSitePatterns Protein kinases ATP-binding region signature. 30 57 IPR017441 GO:0005524
Bisa08g1530 474 ProSiteProfiles Protein kinase domain profile. 24 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1530 474 FunFam Putative cyclin-dependent kinase E-1 108 347 - -
Bisa08g1530 474 CDD STKc_CDK8_like 23 334 - -
Bisa08g1530 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bisa08g1530 474 SUPERFAMILY Protein kinase-like (PK-like) 19 335 IPR011009 -
Bisa08g1530 474 MobiDBLite consensus disorder prediction 369 385 - -
Bisa08g1530 474 FunFam Cyclin-dependent kinase e-1 12 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1530 Bisa-ChrBisa08 33319471 33324398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1530 17 474 Core Cell Cycle Gene Families AT5G63610 78.233 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Bisa08g1530 Pkinase 8.7e-69 CL0016