LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa08g1527	ATGGGCAAGGAAAATTTCACAGAAACAGTAAAGGAAGAAGTCAGTGCTGATGGTTCCTCAAATGTTGAGACCAAGGATTTAGAATCTGGCTCTCGAGATAGTATGGAGAAGGAGACAGGCTGGGCAAGTTGTCGTGTGTGCCAATGTGCTGAATCTGATAAAAGGGGAGATGCAGCACTAGAATTTTTGGGCATCAACCCTGTACTAAGATCGTGCAAAATTGACAAGGAAGTAAGCCCAGATGATGAGGAAATTCCAAAGGGCGTGTCTCTTAAAAGAAATCTTGGAAGCAAGTCTGGGATGATAGAGTTCGTAAGCCCAGGGAAGGATTTTATCTGCAGCGCCAATTTGGAAATAGGTCTGTCTTATCATGGGACATTAGTTGAACTTGGTTGTTGTTGTAAAAATGATCTTGCTTTGGTACACTATGCTTGTGCACTCAAATGGTTTGTCAACCATGGATGTACCATTTGTGAAATATGTGGACACTTGGCAAACAACATCAGAATTTCTGACTTCAACAAGGTTGTTGGTTCTTTGAAGGAGTATGAAGCGCTGAGAGAAAGAATTGCCAGTTGGGAGCCGCCTCCTGCTCAAGTTTGTGCAAATACTGACATGGACCTTGATGCTCTTGCCACTATTCAAAGGCATCAGCTAAGTGAGATTGCACAATGGTTTTGTCCACTTAATAGCAGAAACAGTCACAACAATAACAACGTGGACACGGTTCTACAGGTTTTTTCTGAACAACCTTTAAATACTGTTACTGAAGATGCCACCCCAGCTCAAAATCCTGCAATAAAGTGGGCCATGGAAGGTACAGCAATCCTGCTTGCCACTGGGCTACTTACTATAACCTTTGCATGGGTTATTGCTCCTCGTGTTGGAAAGAAAACTGCAAGAAATGGTCTTCATATCCTACTTGGAGGCATTTGTGCTTTGGCAGTTGTGGTCTTCTTCCTCTTTTTCGTGATTACCAGGATCAAGTATGGACCTGCACGTTATTGGGCAATCTTGTTCGTCTTCTGGTTTCTTGGCTTTGGTATATGGGCTTCACGGACACACAGTGATCATCCAACGTAA	1083	0.4312	MGKENFTETVKEEVSADGSSNVETKDLESGSRDSMEKETGWASCRVCQCAESDKRGDAALEFLGINPVLRSCKIDKEVSPDDEEIPKGVSLKRNLGSKSGMIEFVSPGKDFICSANLEIGLSYHGTLVELGCCCKNDLALVHYACALKWFVNHGCTICEICGHLANNIRISDFNKVVGSLKEYEALRERIASWEPPPAQVCANTDMDLDALATIQRHQLSEIAQWFCPLNSRNSHNNNNVDTVLQVFSEQPLNTVTEDATPAQNPAIKWAMEGTAILLATGLLTITFAWVIAPRVGKKTARNGLHILLGGICALAVVVFFLFFVITRIKYGPARYWAILFVFWFLGFGIWASRTHSDHPT	360

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa08g1527	360	MobiDBLite	consensus disorder prediction	1	37	-	-
	Bisa08g1527	360	SMART	ringv_2	112	162	IPR011016	GO:0008270
	Bisa08g1527	360	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	111	164	IPR013083	-
	Bisa08g1527	360	SUPERFAMILY	RING/U-box	128	164	-	-
	Bisa08g1527	360	PANTHER	ZINC FINGER, RING-CH-TYPE	13	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa08g1527	Bisa-ChrBisa08	33290337	33293737	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa08g1527	1	358	C3H Transcription Factor Family	AT5G63780	52.989	7.49e-127	367